RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RTP2Q5QGT7 225 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 KIAA0319Q5VV43 1072 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 FAM35AQ86V20 835 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ERICH1Q86X53 443 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 PHF13Q86YI8 300 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 SPATA2LQ8IUW3 424 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ANKRD52Q8NB46 1076 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CPA5Q8WXQ8 436 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 RIN2Q8WYP3 895 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 SECISBP2LQ93073 1101 aaKnown RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ZNF653Q96CK0 615 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 SMARCD1Q96GM5 515 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 PCED1BQ96HM7 432 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 B3GALT6Q96L58 329 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 SAMD11Q96NU1 681 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 HNRNPABQ99729 332 aaKnown RBP9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ZCWPW1Q9H0M4 648 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 ISCUQ9H1K1 167 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 LZTFL1Q9NQ48 299 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 CRTAC1Q9NQ79 661 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 KRT82Q9NSB4 513 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 TAS2R14Q9NYV8 317 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 NCANO14594 1321 aa9.48□□□□□ -0.89
CSMD1-208ENST00000520561 VWA8A3KMH1 1905 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 FAM170AA1A519 330 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MYBPHLA2RUH7 354 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 LCHNA4D1U4 455 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 LINC01553A4QN01 128 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 USP27XA6NNY8 438 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 H0YGN5 161 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 AP1G2O75843 785 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 NPR3P17342 541 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 CA8P35219 290 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 RABGGTBP53611 331 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 GALCP54803 685 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 GPC5P78333 572 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 DSG1Q02413 1049 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 C1QBPQ07021 282 aaKnown RBP9.47□□□□□ -0.89
CSMD1-208ENST00000520561 SMARCB1Q12824 385 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 PDCLQ13371 301 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MRPL58Q14197 206 aaKnown RBP9.47□□□□□ -0.89
CSMD1-208ENST00000520561 RAB30Q15771 203 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 IFI16Q16666 785 aaKnown RBP9.47□□□□□ -0.89
CSMD1-208ENST00000520561 CCDC142Q17RM4 750 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 SLC39A12Q504Y0 691 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 FAM171BQ6P995 826 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MMS22LQ6ZRQ5 1243 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 ZNF662Q6ZS27 426 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MON1BQ7L1V2 547 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 TTC30AQ86WT1 665 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 RHOT2Q8IXI1 618 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MCOLN2Q8IZK6 566 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 FUKQ8N0W3 1084 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 UBA3Q8TBC4 463 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 FUBP3Q96I24 572 aaKnown RBP eCLIP9.47□□□□□ -0.89
CSMD1-208ENST00000520561 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 PKMYT1Q99640 499 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 GDF15Q99988 308 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 PLVAPQ9BX97 442 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 PACSIN1Q9BY11 444 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 B3GNT5Q9BYG0 378 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 THAP2Q9H0W7 228 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 ST7Q9NRC1 585 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MRPL17Q9NRX2 175 aaKnown RBP9.47□□□□□ -0.89
CSMD1-208ENST00000520561 ADAM22Q9P0K1 906 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 MTRRQ9UBK8 725 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 GTF3C4Q9UKN8 822 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 STRIP2Q9ULQ0 834 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 SSX2IPQ9Y2D8 614 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 PCDHA11Q9Y5I1 949 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 BACE2Q9Y5Z0 518 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 SCINQ9Y6U3 715 aa9.47□□□□□ -0.89
CSMD1-208ENST00000520561 A0A0A6YYK5 440 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-208ENST00000520561 RCCD1A6NED2 376 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 BTNL10A8MVZ5 291 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 CLDN5O00501 218 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 C2CD2LO14523 706 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 XPO1O14980 1071 aaKnown RBP9.46□□□□□ -0.9
CSMD1-208ENST00000520561 PJA2O43164 708 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 KIF5CO60282 957 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 EFEMP2O95967 443 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 OR4Q2P0C623 313 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 LINC00271P0C7V0 271 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 MMP8P22894 467 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 DNAJB2P25686 324 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 BMPR1AP36894 532 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 GPD2P43304 727 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 ACADSBP45954 432 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 NAP1L1P55209 391 aaKnown RBP9.46□□□□□ -0.9
CSMD1-208ENST00000520561 ARPP19P56211 112 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 PDE4CQ08493 712 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 PTPN20Q4JDL3 420 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
CSMD1-208ENST00000520561 SLC8B1Q6J4K2 584 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms