RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FSCN2O14926 492 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 MGRN1O60291 552 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 NBNO60934 754 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CDH16O75309 829 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 ATP5HO75947 161 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 BAIAP3O94812 1187 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CSPG5O95196 566 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 SHBGP04278 402 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CKBP12277 381 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 MYCLP12524 364 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CYP11B1P15538 503 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 EDNRBP24530 442 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 SSTR3P32745 418 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 HSD17B4P51659 736 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 ZNF200P98182 395 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 GHRHRQ02643 423 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 GCNT1Q02742 428 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 PTPN11Q06124 597 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 PPP3CAQ08209 521 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 AUHQ13825 339 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 SNRNP35Q16560 246 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CLEC16AQ2KHT3 1053 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 TNFAIP8L3Q5GJ75 292 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 TMEM31Q5JXX7 168 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 PCNX4Q63HM2 1172 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 HAUS6Q7Z4H7 955 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 NOP9Q86U38 636 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 MAP4K3Q8IVH8 894 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 C4orf19Q8IY42 314 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 LRRC34Q8IZ02 419 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 FBXL13Q8NEE6 735 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CYP2W1Q8TAV3 490 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 KRT35Q92764 455 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 ARHGEF2Q92974 986 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 RMDN3Q96TC7 470 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 PRMT1Q99873 361 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 TMEM117Q9H0C3 514 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 CDC42EP4Q9H3Q1 356 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 POLD4Q9HCU8 107 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 TXLNGQ9NUQ3 528 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 COL20A1Q9P218 1284 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 LGALS13Q9UHV8 139 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 MCM8Q9UJA3 840 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 COQ4Q9Y3A0 265 aa9.12□□□□□ -0.95
CTNNA1-223ENST00000520520 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CYP26A1O43174 497 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 SNX3O60493 162 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 LPXNO60711 386 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ATP2C2O75185 946 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 WFS1O76024 890 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 UPP2O95045 317 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ATP6V1G2O95670 118 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 RARAP10276 462 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 DLATP10515 647 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 PYGMP11217 842 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 KRT5P13647 590 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 GARTP22102 1010 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 KCNA5P22460 613 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 YWHABP31946 246 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ELF1P32519 619 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 STX2P32856 288 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 NSFP46459 744 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 RARRES1P49788 294 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 PSEN2P49810 448 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 PSMC5P62195 406 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ELF3P78545 371 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ATP11AP98196 1134 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 IL9RQ01113 521 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 FMO1Q01740 532 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CCDC15Q0P6D6 951 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 MTMR1Q13613 665 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 GPNMBQ14956 572 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 STXBP2Q15833 593 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 DGKDQ16760 1214 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ZNF618Q5T7W0 954 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ZNF746Q6NUN9 644 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 HIBCHQ6NVY1 386 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 TTC27Q6P3X3 843 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CNKSR3Q6P9H4 555 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 OTUD6AQ7L8S5 288 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 SPATA21Q7Z572 469 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 CEP57Q86XR8 500 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 DNAAF5Q86Y56 855 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 RELL1Q8IUW5 271 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 RHOT1Q8IXI2 618 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 DAW1Q8N136 415 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 MCPH1Q8NEM0 835 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 ATL2Q8NHH9 583 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 MDM1Q8TC05 714 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 SYTL5Q8TDW5 730 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 NSUN6Q8TEA1 469 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
CTNNA1-223ENST00000520520 WNT8BQ93098 351 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms