RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 VWA1Q6PCB0 445 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 MICALCLQ6ZW33 695 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 ARHGEF25Q86VW2 580 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 TICAM2Q86XR7 235 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 PDSS2Q86YH6 399 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 Q8NA96 180 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 PDPRQ8NCN5 879 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 B3GALNT2Q8NCR0 500 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 TMIEQ8NEW7 156 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 TOR1AIP2Q8NFQ8 470 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 SCAMP4Q969E2 229 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 PGBD1Q96JS3 809 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 PDLIM2Q96JY6 352 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 SGCZQ96LD1 299 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 LMBRD1Q9NUN5 540 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 TRMT13Q9NUP7 481 aaKnown RBP4.94□□□□□ -1.62
SQLE-204ENST00000520493 PNPOQ9NVS9 261 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 RLIMQ9NVW2 624 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 FOXJ2Q9P0K8 574 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 SALL3Q9BXA9 1300 aa4.94□□□□□ -1.62
SQLE-204ENST00000520493 MPPED1O15442 326 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 TCEA3O75764 348 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 CHEK2O96017 543 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 CASP5P51878 434 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 POU5F1BQ06416 359 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 CD300EQ496F6 205 aaPredicted RBP4.93□□□□□ -1.62
SQLE-204ENST00000520493 FLYWCH1Q4VC44 716 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 ZNF362Q5T0B9 420 aaPredicted RBP4.93□□□□□ -1.62
SQLE-204ENST00000520493 APOA5Q6Q788 366 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 HEATR3Q7Z4Q2 680 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 ADGRG5Q8IZF4 528 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 PLBD2Q8NHP8 589 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 PARD3BQ8TEW8 1205 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 BRI3BPQ8WY22 251 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 SLC35A4Q96G79 324 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 MSLNLQ96KJ4 702 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 TRIB1Q96RU8 372 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 VRK1Q99986 396 aaPredicted RBP4.93□□□□□ -1.62
SQLE-204ENST00000520493 HERPUD2Q9BSE4 406 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 COLEC11Q9BWP8 271 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 UNKQ9C0B0 810 aaKnown RBP4.93□□□□□ -1.62
SQLE-204ENST00000520493 STARD7Q9NQZ5 370 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 CTTNBP2NLQ9P2B4 639 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 PAXBP1Q9Y5B6 917 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 PCDHGB6Q9Y5F9 930 aa4.93□□□□□ -1.62
SQLE-204ENST00000520493 A0A1W2PPL8 197 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 RHPN2P1A8MT19 583 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 H3BUI4 141 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 MYO1FO00160 1098 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 POLRMTO00411 1230 aaKnown RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 PROM1O43490 865 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 SUN1O94901 812 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 IGLV2-14P01704 120 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 PTH2RP49190 550 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 NXPH1P58417 271 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 ITIH3Q06033 890 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 CHAF1AQ13111 956 aaPredicted RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 PLS1Q14651 629 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 INO80DQ53TQ3 878 aaPredicted RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 EMC10Q5UCC4 262 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 ERAP2Q6P179 960 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 C1orf228Q6PIY5 440 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 MYLK4Q86YV6 388 aaPredicted RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 OR2C3Q8N628 320 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 IL31RAQ8NI17 732 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 SLC30A5Q8TAD4 765 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 UROC1Q96N76 676 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 TBCBQ99426 244 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 CNPPD1Q9BV87 410 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 PRDM13Q9H4Q3 707 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 ATP6V0A4Q9HBG4 840 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 ARFGAP3Q9NP61 516 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 SARS2Q9NP81 518 aaKnown RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 CNNM1Q9NRU3 951 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 SEMA4GQ9NTN9 838 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 PIH1D1Q9NWS0 290 aaKnown RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 RGS17Q9UGC6 210 aaPredicted RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 FEZ2Q9UHY8 353 aaPredicted RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 SLC45A2Q9UMX9 530 aa4.92□□□□□ -1.62
SQLE-204ENST00000520493 POLR2AP24928 1970 aaKnown RBP4.92□□□□□ -1.62
SQLE-204ENST00000520493 ZNF785A8K8V0 405 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 F2RL2O00254 374 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 TRIAP1O43715 76 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 SOAT2O75908 522 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 GNAI2P04899 355 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 GJB1P08034 283 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 MYL3P08590 195 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 GATA3P23771 443 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 GRIA3P42263 894 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 PIK3CBP42338 1070 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 NPTX2P47972 431 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 PIK3CGP48736 1102 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
SQLE-204ENST00000520493 SNAPC2Q13487 334 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 PTPRRQ15256 657 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 IZUMO3Q5VZ72 239 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 PAPD7Q5XG87 772 aaKnown RBP4.91□□□□□ -1.62
SQLE-204ENST00000520493 KIAA0895LQ68EN5 471 aa4.91□□□□□ -1.62
SQLE-204ENST00000520493 NSUN7Q8NE18 718 aaKnown RBP4.91□□□□□ -1.62
SQLE-204ENST00000520493 KBTBD7Q8WVZ9 684 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms