RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PFKFB1P16118 471 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 DDX6P26196 483 aaKnown RBP eCLIP17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 CCR3P51677 355 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 PSMD6Q15008 389 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 KNOP1Q1ED39 458 aaKnown RBP17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 ZNF528Q3MIS6 628 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 MDH1BQ5I0G3 518 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 C1orf228Q6PIY5 440 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 DPH6Q7L8W6 267 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 SPATA18Q8TC71 538 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 CCDC47Q96A33 483 aaKnown RBP17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 CHRDQ9H2X0 955 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 ABCB6Q9NP58 842 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 ZSCAN32Q9NX65 697 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 ZMYM5Q9UJ78 669 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 CDH9Q9ULB4 789 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 PCDHGA2Q9Y5H1 932 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 ABL1P00519 1130 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 F11P03951 625 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 HMGA1P17096 107 aaKnown RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 BDNFP23560 247 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 LMO2P25791 158 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 CTHP32929 405 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 SNRPFP62306 86 aaKnown RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 KCNB1Q14721 858 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 MAPRE1Q15691 268 aaKnown RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 ITPRIPL2Q3MIP1 535 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 WDR72Q3MJ13 1102 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 TRIM68Q6AZZ1 485 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 SCARA5Q6ZMJ2 495 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 RALGPS2Q86X27 583 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 CXorf38Q8TB03 319 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 GOLGA5Q8TBA6 731 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 RUBCNQ92622 972 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 LRRC3BQ96PB8 259 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 MRPL45Q9BRJ2 306 aaKnown RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 GKN1Q9NS71 199 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 TDP1Q9NUW8 608 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 RAB23Q9ULC3 237 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 CCL26Q9Y258 94 aa17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 NUP210Q8TEM1 1887 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-42-201ENST00000520410 COL4A2P08572 1712 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 A8MXQ7 604 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 ARNTLO00327 626 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 WARSP23381 471 aaKnown RBP17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 GNL1P36915 607 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 CASP4P49662 377 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 PRR23BQ6ZRT6 265 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 KBTBD7Q8WVZ9 684 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 USP13Q92995 863 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 PAGE5Q96GU1 130 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 FUBP3Q96I24 572 aaKnown RBP eCLIP17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 EBF3Q9H4W6 596 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 RCOR1Q9UKL0 485 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 PIEZO1Q92508 2521 aa17.25■□□□□ 0.35
IGHV3-42-201ENST00000520410 SHISA7A6NL88 538 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 GABRDO14764 452 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 ACTN4O43707 911 aaKnown RBP17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 NOL4O94818 638 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 CST3P01034 146 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 USP17L7P0C7H9 530 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 CHRNB1P11230 501 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 ID4P47928 161 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 CXCL12P48061 93 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 IFNAR2P48551 515 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 NRLP54845 237 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 MYL6P60660 151 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 SATB1Q01826 763 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 LPAL2Q16609 132 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 ZNF699Q32M78 642 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 DGKKQ5KSL6 1271 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 CEP135Q66GS9 1140 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 HEATR6Q6AI08 1181 aaKnown RBP17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 TXNDC11Q6PKC3 985 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 Q6ZS52 159 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 MON1AQ86VX9 555 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 SYAP1Q96A49 352 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 IER2Q9BTL4 223 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 MED10Q9BTT4 135 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 PRMT8Q9NR22 394 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 SMG5Q9UPR3 1016 aaKnown RBP17.24■□□□□ 0.35
IGHV3-42-201ENST00000520410 TRIM66O15016 1216 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 SYKP43405 635 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 EHHADHQ08426 723 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 FZD5Q13467 585 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 RUNX3Q13761 415 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 BMT2Q1RMZ1 405 aa17.23■□□□□ 0.35
IGHV3-42-201ENST00000520410 TMEM150AQ86TG1 271 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms