RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 GPR75-ASB3A0A0A6YYF3 556 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 CPB1P15086 417 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 GALCP54803 685 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 STK4Q13043 487 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 SPATA2LQ8IUW3 424 aaPredicted RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 SLC30A5Q8TAD4 765 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 GTF3C2Q8WUA4 911 aaPredicted RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 CEP170BQ9Y4F5 1589 aaPredicted RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 AGLP35573 1532 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 TAF4O00268 1085 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 ASNA1O43681 348 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 RGS2P41220 211 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 POU5F1BQ06416 359 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 NCOA4Q13772 614 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 EXD1Q8NHP7 514 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 IARS2Q9NSE4 1012 aaKnown RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 CIDEBQ9UHD4 219 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 ADAMTS13Q76LX8 1427 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 KCNN4O15554 427 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 CCDC22O60826 627 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 SERPIND1P05546 499 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 GSTT1P30711 240 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 GRIK1P39086 918 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 TPI1P60174 286 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PRKCEQ02156 737 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 RBBP8NLQ8NC74 664 aaPredicted RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PIK3R2O00459 728 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 HSPA13P48723 471 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 ITIH4Q14624 930 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 WDR72Q3MJ13 1102 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 SEPT1Q8WYJ6 367 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 RIT2Q99578 217 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 SLC13A1Q9BZW2 595 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PRDM16Q9HAZ2 1276 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PCDHB8Q9UN66 801 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PITPNM2Q9BZ72 1349 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PSMD3O43242 534 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 EXTL3O43909 919 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 NR3C2P08235 984 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 SNAPC2Q13487 334 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 PIGHQ14442 188 aaPredicted RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 LRRC14Q15048 493 aa12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 NMD3Q96D46 503 aaKnown RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 DDX50Q9BQ39 737 aaKnown RBP12.6□□□□□ -0.39
ERGIC1-208ENST00000520399 GSCP56915 257 aaPredicted RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 PPIDQ08752 370 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 TRADDQ15628 312 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 USP39Q53GS9 565 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 ANKMY2Q8IV38 441 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 TMEM8AQ9HCN3 771 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 ZC3H7BQ9UGR2 993 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 ATP6V1HQ9UI12 483 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 AP3B1O00203 1094 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 CCDC166P0CW27 439 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 GUCA1AP43080 201 aaPredicted RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 PRAMEP78395 509 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 SKIV2LQ15477 1246 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 P3H1Q32P28 736 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 KDM7AQ6ZMT4 941 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 SEC24DO94855 1032 aaPredicted RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 AGTP01019 485 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 YTHDF3Q7Z739 585 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 TC2NQ8N9U0 490 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 DRAXINQ8NBI3 349 aaPredicted RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 MCEEQ96PE7 176 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 SIK2Q9H0K1 926 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 DCLRE1BQ9H816 532 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 AIPL1Q9NZN9 384 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 DCTN4Q9UJW0 460 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 FAM47E-STBD1D6RA91 191 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 PGM1P36871 562 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 FXR1P51114 621 aaKnown RBP eCLIP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 DIS3LQ8TF46 1054 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
ERGIC1-208ENST00000520399 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 SYNCRIPO60506 623 aaKnown RBP12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 KLK7P49862 253 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 CYTH1Q15438 398 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 ARMC6Q6NXE6 501 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 PID1Q7Z2X4 250 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 CCDC103Q8IW40 242 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 TCAIMQ8N3R3 496 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 RTL3Q8N8U3 475 aaKnown RBP12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 CHST13Q8NET6 341 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 HES6Q96HZ4 224 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 MED15Q96RN5 788 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.39
ERGIC1-208ENST00000520399 RBM47A0AV96 593 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms