RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZNF668Q96K58 619 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 PHACTR3Q96KR7 559 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 RBM15Q96T37 977 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 PRPF18Q99633 342 aaKnown RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 SENP7Q9BQF6 1050 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 SLC46A2Q9BY10 475 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 TTYH3Q9C0H2 523 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 HERC5Q9UII4 1024 aaKnown RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 DTNAQ9Y4J8 743 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 OR2W5A6NFC9 320 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 PRRT4C9JH25 899 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 ASNA1O43681 348 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 COQ9O75208 318 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 SRGNP10124 158 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 HK1P19367 917 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 MST1P26927 711 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 ATICP31939 592 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 PXNP49023 591 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 DGKEP52429 567 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 RABGGTBP53611 331 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 HHEXQ03014 270 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 KRT17Q04695 432 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 EFR3AQ14156 821 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 ARHGAP15Q53QZ3 475 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 FBXO47Q5MNV8 452 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 TMTC4Q5T4D3 741 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 RAP1GAP2Q684P5 730 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 TMPRSS9Q7Z410 1059 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 FUKQ8N0W3 1084 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 FAM227BQ96M60 508 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 GNRHR2Q96P88 292 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 NEU1Q99519 415 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZCWPW1Q9H0M4 648 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 SAYSD1Q9NPB0 183 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 HELLSQ9NRZ9 838 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 CTTNBP2NLQ9P2B4 639 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 TBC1D30Q9Y2I9 924 aa6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 MTO1Q9Y2Z2 717 aaKnown RBP6.2□□□□□ -1.42
HMGB1P46-201ENST00000520062 GOLGA6L6A8MZA4 724 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 PIAS2O75928 621 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 TNFRSF6BO95407 300 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPATA31D3P0C874 917 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 KCNA2P16389 499 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 CST5P28325 142 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 PPIFP30405 207 aaKnown RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 LILRA4P59901 499 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 NHLH2Q02577 135 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 TSHZ3Q63HK5 1081 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 TCTN3Q6NUS6 607 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPATA31D4Q6ZUB0 917 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 GSPT2Q8IYD1 628 aaKnown RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 COLGALT2Q8IYK4 626 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 CLASRPQ8N2M8 674 aaKnown RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 NAXEQ8NCW5 288 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 OR56A1Q8NGH5 318 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 BPIFB1Q8TDL5 484 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 PPM1MQ96MI6 270 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 DCLRE1CQ96SD1 692 aaKnown RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 FAM167BQ9BTA0 163 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 PTDSS2Q9BVG9 487 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 TRIM5Q9C035 493 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 TP63Q9H3D4 680 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 TMOD4Q9NZQ9 345 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZFR2Q9UPR6 939 aaKnown RBP6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 RNF114Q9Y508 228 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPATA31A3Q5VYP0 1347 aa6.19□□□□□ -1.42
HMGB1P46-201ENST00000520062 A0A1B0GTW7 788 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 NPEPPSL1A6NEC2 478 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 EIF3FO00303 357 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 CYP27B1O15528 508 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 FAM155BO75949 473 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 NTSR2O95665 410 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 AGR2O95994 175 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 HLA-DOAP06340 250 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 PECAM1P16284 738 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 ITGALP20701 1170 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 KCNA3P22001 575 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 ANXA11P50995 505 aaKnown RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZNF134P52741 427 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 MYO1EQ12965 1108 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 CNGB1Q14028 1251 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 TAF5Q15542 800 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 TAF12Q16514 161 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 ADCK5Q3MIX3 580 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 INTS11Q5TA45 600 aaKnown RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 MANEALQ5VSG8 457 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 CACHD1Q5VU97 1274 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 SFRP4Q6FHJ7 346 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 SULT6B1Q6IMI4 303 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 KLHL17Q6TDP4 642 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZNF280BQ86YH2 543 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 SUGP1Q8IWZ8 645 aaKnown RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZDHHC12Q96GR4 267 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 LRIG1Q96JA1 1093 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 MPP4Q96JB8 637 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 DDX23Q9BUQ8 820 aaKnown RBP6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 AS3MTQ9HBK9 375 aa6.18□□□□□ -1.42
HMGB1P46-201ENST00000520062 VSX1Q9NZR4 365 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms