RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.66□□□□□ -0.54
PVT1-208ENST00000519481 MON1AQ86VX9 555 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 IQUBQ8NA54 791 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 LINC00301Q8NCQ3 95 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 ZSWIM2Q8NEG5 633 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 TRMT2BQ96GJ1 504 aaKnown RBP11.66□□□□□ -0.54
PVT1-208ENST00000519481 FUBP3Q96I24 572 aaKnown RBP eCLIP11.66□□□□□ -0.54
PVT1-208ENST00000519481 INTS13Q9NVM9 706 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 FRYLO94915 3013 aa11.66□□□□□ -0.54
PVT1-208ENST00000519481 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 EIF3DO15371 548 aaKnown RBP eCLIP11.65□□□□□ -0.543e-7■■■■□ 25.7
PVT1-208ENST00000519481 CUTAO60888 179 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 LRP3O75074 770 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 NOL4O94818 638 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 YEATS4O95619 227 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 CKMP06732 381 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 USP17L7P0C7H9 530 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 PDIA4P13667 645 aaKnown RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 GPR15P49685 360 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 PDE6CP51160 858 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 CCINQ13939 588 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 SDHAF4Q5VUM1 108 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 LMBRD2Q68DH5 695 aaPredicted RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 HEATR6Q6AI08 1181 aaKnown RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 Q6ZS52 159 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 WDR49Q8IV35 697 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 CPA6Q8N4T0 437 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 TTC16Q8NEE8 873 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 DHX58Q96C10 678 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 FNBP1Q96RU3 617 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 FAM83CQ9BQN1 747 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 FGFBP2Q9BYJ0 223 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 EBF3Q9H4W6 596 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 TRPC7Q9HCX4 862 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 KBTBD4Q9NVX7 518 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 HSPBP1Q9NZL4 362 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 EHD2Q9NZN4 543 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 TFIP11Q9UBB9 837 aaKnown RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 MAGEC2Q9UBF1 373 aaPredicted RBP11.65□□□□□ -0.54
PVT1-208ENST00000519481 SIX4Q9UIU6 781 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 CDH9Q9ULB4 789 aa11.65□□□□□ -0.54
PVT1-208ENST00000519481 K7ESF4 209 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 GABRDO14764 452 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 FOXD2O60548 495 aaPredicted RBP11.64□□□□□ -0.55
PVT1-208ENST00000519481 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
PVT1-208ENST00000519481 TNNI1P19237 187 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 ANXA13P27216 316 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 HOXA6P31267 233 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 MAGEA11P43364 429 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 IFNAR2P48551 515 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 SNRPFP62306 86 aaKnown RBP11.64□□□□□ -0.55
PVT1-208ENST00000519481 FAM160A1Q05DH4 1040 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 SPEM2Q0P670 501 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 NR1H3Q13133 447 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 KCNB1Q14721 858 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 SOWAHAQ2M3V2 549 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 VSTM1Q6UX27 236 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 TMEM150AQ86TG1 271 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 WDR5BQ86VZ2 330 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 OSTM1Q86WC4 334 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 CBWD2Q8IUF1 395 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 MYRFLQ96LU7 910 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 CEP295NLQ96MC4 621 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 SYT15Q9BQS2 421 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 RTKNQ9BST9 563 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 TRIM9Q9C026 710 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 SNX25Q9H3E2 840 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 MAGEF1Q9HAY2 307 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 SLC8A2Q9UPR5 921 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 CCL26Q9Y258 94 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 DMXL1Q9Y485 3027 aa11.64□□□□□ -0.55
PVT1-208ENST00000519481 UBE4BO95155 1302 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 ZNF638Q14966 1978 aaKnown RBP11.63□□□□□ -0.55
PVT1-208ENST00000519481 TRDMT1O14717 391 aaKnown RBP11.63□□□□□ -0.55
PVT1-208ENST00000519481 HRO43593 1189 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 DLATP10515 647 aaKnown RBP11.63□□□□□ -0.55
PVT1-208ENST00000519481 DRD1P21728 446 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 GRIK1P39086 918 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 CYP27A1Q02318 531 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 DMWDQ09019 674 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 MTF1Q14872 753 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 FBXO43Q4G163 708 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 TMEM196Q5HYL7 178 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 TRIM68Q6AZZ1 485 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 FAM171BQ6P995 826 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 RDH13Q8NBN7 331 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 STKLD1Q8NE28 680 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 OR5B17Q8NGF7 314 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 CCDC26Q8TAB7 109 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 CXorf38Q8TB03 319 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 ZNF507Q8TCN5 953 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 ATP2A3Q93084 1043 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms