RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MYL6P60660 151 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 SLC25A11Q02978 314 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 SUPT20HL1Q3ZLR7 823 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 SNRNP48Q6IEG0 339 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 PPIL6Q8IXY8 311 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 FBXO36Q8NEA4 188 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 MTMR12Q9C0I1 747 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 PPCSQ9HAB8 311 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 ALG13Q9NP73 1137 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 CISHQ9NSE2 258 aa17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 DDX56Q9NY93 547 aaKnown RBP17.4■□□□□ 0.38
PCDHGA11-202ENST00000518882 H0Y3Z8 333 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 TMEM63AO94886 807 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 LSM8O95777 96 aaKnown RBP17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 ABCD1P33897 745 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 RFC1P35251 1148 aaPredicted RBP17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 RPL22P35268 128 aaKnown RBP17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 ARL2P36404 184 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 KIAA0319LQ8IZA0 1049 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 NIPA2Q8N8Q9 360 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 ATP11CQ8NB49 1132 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 TMEM35BQ8NCS4 154 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 DCAKDQ8WVC6 231 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 SPDL1Q96EA4 605 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 ACSS3Q9H6R3 686 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 KAT6AQ92794 2004 aa17.39■□□□□ 0.37
PCDHGA11-202ENST00000518882 CST8O60676 142 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 EGFRP00533 1210 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 CD48P09326 243 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 PTPN4P29074 926 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 NRLP54845 237 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 BLMHQ13867 455 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 BANPQ8N9N5 519 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 JOSD2Q8TAC2 188 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 IMPG2Q9BZV3 1241 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 TLE6Q9H808 572 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 FETUBQ9UGM5 382 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 AGTPBP1Q9UPW5 1226 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 LRRC42Q9Y546 428 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 PHIPQ8WWQ0 1821 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 LRCH4O75427 683 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 WEE2P0C1S8 567 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 RASSF2P50749 326 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 ARL4CP56559 192 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 SPDYAQ5MJ70 313 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 FAM182AQ5T1J6 154 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 FYB2Q5VWT5 728 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 SCARA5Q6ZMJ2 495 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 UNC45BQ8IWX7 931 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 ENDOVQ8N8Q3 282 aaKnown RBP17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 MICAL1Q8TDZ2 1067 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 LNPEPQ9UIQ6 1025 aa17.38■□□□□ 0.37
PCDHGA11-202ENST00000518882 E7ESA3 106 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 FAM189A1O60320 539 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 OATP04181 439 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 PHBP35232 272 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 PCGF5Q86SE9 256 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 LRRC6Q86X45 466 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 KCNN1Q92952 543 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 PRR11Q96HE9 360 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 SLC24A3Q9HC58 644 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 CYTH4Q9UIA0 394 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 PSMA2P25787 234 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 BBS9Q3SYG4 887 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 PTPN20Q4JDL3 420 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 WASHC2DQ5SRD0 308 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 POLNQ7Z5Q5 900 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 ZBTB33Q86T24 672 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 IGDCC3Q8IVU1 814 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 MANSC1Q9H8J5 431 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 ZNF214Q9UL59 606 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 MAFBQ9Y5Q3 323 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 UTRNP46939 3433 aa17.37■□□□□ 0.37
PCDHGA11-202ENST00000518882 A0A0G2JND7 137 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 TROVE2P10155 538 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 CDH5P33151 784 aaPredicted RBP17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 TAP1Q03518 808 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 CAPSQ13938 189 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 DENND1BQ6P3S1 775 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 BRSK2Q8IWQ3 736 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 ZNF398Q8TD17 642 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 CADM1Q9BY67 442 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 SAR1AQ9NR31 198 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 ARL8BQ9NVJ2 186 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 XPO7Q9UIA9 1087 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 CCDC189A1A4V9 331 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 E7ENQ6 273 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 TM9SF1O15321 606 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 KDELR1P24390 212 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 PTDSS1P48651 473 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms