RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 BIRC2Q13490 618 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 ELF2Q15723 593 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 ZNF618Q5T7W0 954 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 FHL5Q5TD97 284 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 CDPF1Q6NVV7 123 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 LETMD1Q6P1Q0 360 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 PDXDC1Q6P996 788 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 POMZP3Q6PJE2 187 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MAMDC4Q6UXC1 1216 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 TMC3Q7Z5M5 1100 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 KCT2Q8NC54 265 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 SLC16A11Q8NCK7 471 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 C2CD4AQ8NCU7 369 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-204ENST00000517862 SEPT8Q92599 483 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 FGF11Q92914 225 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 RCC1LQ96I51 464 aaKnown RBP3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MAGEB10Q96LZ2 347 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-204ENST00000517862 RPS6KC1Q96S38 1066 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 LGMNQ99538 433 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MPHOSPH6Q99547 160 aaKnown RBP3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MTG1Q9BT17 334 aaPredicted RBP3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MCMBPQ9BTE3 642 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 DSCC1Q9BVC3 393 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 SLITRK6Q9H5Y7 841 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 GREM2Q9H772 168 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 DONSONQ9NYP3 566 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MIS18AQ9NYP9 233 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 CEP131Q9UPN4 1083 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 PCDHA8Q9Y5H6 950 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 NUMBLQ9Y6R0 609 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 MYH3P11055 1940 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 TACC2O95359 2948 aa3.87□□□□□ -1.79
CPNE3-204ENST00000517862 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 BRINP1O60477 761 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 PRKD3O94806 890 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 RHOBTB1O94844 696 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 LRIG2O94898 1065 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 CLDN1O95832 211 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 NFICP08651 508 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 RNF224P0DH78 156 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 MED14OSP0DP75 135 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 BPIP17213 487 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 VCAM1P19320 739 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 ADMP35318 185 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 ATXN3P54252 364 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 IL2P60568 153 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 RNF4P78317 190 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 PFKPQ01813 784 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 MAP4K2Q12851 820 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 HTR4Q13639 388 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 MLC1Q15049 377 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 PLK5Q496M5 336 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 ANKRD39Q53RE8 183 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 SLC35F1Q5T1Q4 408 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 SYDE2Q5VT97 1194 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 PPP4R4Q6NUP7 873 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 ZCCHC8Q6NZY4 707 aaKnown RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 KSR2Q6VAB6 950 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 GPR149Q86SP6 731 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 MTDHQ86UE4 582 aaKnown RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 PPIL6Q8IXY8 311 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 SPEM1Q8N4L4 309 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 FAM133AQ8N9E0 248 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 OR2W6PQ8NHA6 318 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 TTC8Q8TAM2 541 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 CHMP4CQ96CF2 233 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 ZNF689Q96CS4 500 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 TMEM176AQ96HP8 235 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 TCF25Q9BQ70 676 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 CDH19Q9H159 772 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 RPAP3Q9H6T3 665 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 IFT22Q9H7X7 185 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 LMAN1LQ9HAT1 526 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 VTA1Q9NP79 307 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 GEMIN8Q9NWZ8 242 aaKnown RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 HOXC10Q9NYD6 342 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 SAMD15Q9P1V8 674 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 IP6K2Q9UHH9 426 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 TMEFF2Q9UIK5 374 aaPredicted RBP3.86□□□□□ -1.79
CPNE3-204ENST00000517862 ZNF180Q9UJW8 692 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 COQ6Q9Y2Z9 468 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 FHOD1Q9Y613 1164 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 LRRK1Q38SD2 2015 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 RYR3Q15413 4870 aa3.86□□□□□ -1.79
CPNE3-204ENST00000517862 WNK1Q9H4A3 2382 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 MXRA5Q9NR99 2828 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 THADAQ6YHU6 1953 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 HNRNPRO43390 633 aaKnown RBP3.85□□□□□ -1.79
CPNE3-204ENST00000517862 FGF18O76093 207 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 SLC25A27O95847 323 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 KRT18P05783 430 aaKnown RBP3.85□□□□□ -1.79
CPNE3-204ENST00000517862 THBDP07204 575 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 CD3EP07766 207 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 GLI1P08151 1106 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 SRGAP2CP0DJJ0 459 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 MYBL2P10244 700 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 LCP1P13796 627 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 CD99P14209 185 aa3.85□□□□□ -1.79
CPNE3-204ENST00000517862 ENGP17813 658 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms