RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 CPXM1Q96SM3 734 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 FAM129AQ9BZQ8 928 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 DDX47Q9H0S4 455 aaKnown RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ST7Q9NRC1 585 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 FAM114A2Q9NRY5 505 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 TRMT13Q9NUP7 481 aaKnown RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ASNSD1Q9NWL6 643 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ZNF446Q9NWS9 450 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 DMGDHQ9UI17 866 aaKnown RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 FRMPD3Q5JV73 1810 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ARVCFO00192 962 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 DNM1LO00429 736 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 RNF8O76064 485 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 SEC31AO94979 1220 aaKnown RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 CKBP12277 381 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 MARCKSL1P49006 195 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 DR1Q01658 176 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ORC1Q13415 861 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 C2CD6Q53TS8 623 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ZFYVE27Q5T4F4 411 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 FAM102AQ5T9C2 384 aaPredicted RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 CYP4A22Q5TCH4 519 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 LHX8Q68G74 356 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 SYDE1Q6ZW31 735 aaPredicted RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ACOT1Q86TX2 421 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 C12orf50Q8NA57 414 aaPredicted RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ANKRD52Q8NB46 1076 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 PKNOX2Q96KN3 472 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 GAD1Q99259 594 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 ADAM2Q99965 735 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 AGO3Q9H9G7 860 aaKnown RBP12.44□□□□□ -0.42
SPIDR-203ENST00000517693 EPB41L5Q9HCM4 733 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 PCYOX1Q9UHG3 505 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 DSEQ9UL01 958 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
SPIDR-203ENST00000517693 SCN1AP35498 2009 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 GOLGA8SH3BPF8 625 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 CYB561D2O14569 222 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 MAP2K7O14733 419 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 FSCN2O14926 492 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 EOMESO95936 686 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 ERBB2P04626 1255 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 PTPN7P35236 360 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
SPIDR-203ENST00000517693 SLC7A5Q01650 507 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 ZNF618Q5T7W0 954 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 PPP1R26Q5T8A7 1209 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-203ENST00000517693 AGMOQ6ZNB7 445 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 PHLDB2Q86SQ0 1253 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 AENQ8WTP8 325 aaKnown RBP12.43□□□□□ -0.42
SPIDR-203ENST00000517693 RSPH1Q8WYR4 309 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 CAVIN3Q969G5 261 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 MAGOHBQ96A72 148 aaKnown RBP12.43□□□□□ -0.42
SPIDR-203ENST00000517693 HSFY1Q96LI6 401 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 ZFP42Q96MM3 310 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 TRIM7Q9C029 511 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
SPIDR-203ENST00000517693 USTQ9Y2C2 406 aa12.43□□□□□ -0.42
SPIDR-203ENST00000517693 INPPL1O15357 1258 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 HSPA1AP0DMV8 641 aaKnown RBP12.42□□□□□ -0.42
SPIDR-203ENST00000517693 HSPA1BP0DMV9 641 aaKnown RBP12.42□□□□□ -0.42
SPIDR-203ENST00000517693 ODC1P11926 461 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 COL6A1P12109 1028 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 PCSK1P29120 753 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 LMNB2Q03252 620 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 SOX4Q06945 474 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-203ENST00000517693 CASP8Q14790 479 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 PKDCCQ504Y2 493 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 B3GALNT2Q8NCR0 500 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 URGCPQ8TCY9 931 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 LRRC19Q9H756 370 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 GOLGA2P5Q9HBQ8 144 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 AMACRQ9UHK6 382 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 PTCH2Q9Y6C5 1203 aa12.42□□□□□ -0.42
SPIDR-203ENST00000517693 NDC80O14777 642 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 TJP3O95049 919 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
SPIDR-203ENST00000517693 KRT1P04264 644 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 GLI1P08151 1106 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 GPD1P21695 349 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 PCK1P35558 622 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 SCNN1GP51170 649 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 LLGL2Q6P1M3 1020 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 ARCQ7LC44 396 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 TMEM110Q86TL2 294 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 ECHDC2Q86YB7 292 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 CCDC105Q8IYK2 499 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 GOLGA6L1Q8N7Z2 621 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 UBA3Q8TBC4 463 aa12.41□□□□□ -0.42
SPIDR-203ENST00000517693 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms