RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SMYD4Q8IYR2 804 aaPredicted RBP26.31■■□□□ 1.8
PVT1-204ENST00000517525 PRSS33Q8NF86 280 aa26.31■■□□□ 1.8
PVT1-204ENST00000517525 FLCNQ8NFG4 579 aa26.31■■□□□ 1.8
PVT1-204ENST00000517525 SPATA17Q96L03 361 aa26.31■■□□□ 1.8
PVT1-204ENST00000517525 MAGEC2Q9UBF1 373 aaPredicted RBP26.31■■□□□ 1.8
PVT1-204ENST00000517525 NXF1Q9UBU9 619 aaKnown RBP26.31■■□□□ 1.8
PVT1-204ENST00000517525 CA14Q9ULX7 337 aa26.31■■□□□ 1.8
PVT1-204ENST00000517525 ASS1P00966 412 aaKnown RBP26.3■■□□□ 1.8
PVT1-204ENST00000517525 PDGFRBP09619 1106 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 KRT13P13646 458 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 DDX6P26196 483 aaKnown RBP eCLIP26.3■■□□□ 1.8
PVT1-204ENST00000517525 CCDC142Q17RM4 750 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 SLC44A4Q53GD3 710 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 VITQ6UXI7 678 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 TMEM150AQ86TG1 271 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 ADSSL1Q8N142 457 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 OR6B3Q8NGW1 331 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 TRMT61BQ9BVS5 477 aaKnown RBP26.3■■□□□ 1.8
PVT1-204ENST00000517525 IRF2BPLQ9H1B7 796 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 TBC1D17Q9HA65 648 aa26.3■■□□□ 1.8
PVT1-204ENST00000517525 UXTQ9UBK9 157 aaPredicted RBP26.3■■□□□ 1.8
PVT1-204ENST00000517525 CETN3O15182 167 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 GALR2O43603 387 aaPredicted RBP26.29■■□□□ 1.8
PVT1-204ENST00000517525 P4HA1P13674 534 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 PTPN1P18031 435 aaKnown RBP26.29■■□□□ 1.8
PVT1-204ENST00000517525 PPP1R2P41236 205 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 GPR15P49685 360 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 PTPN5P54829 565 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 NLRP12P59046 1061 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 PSMC1P62191 440 aaKnown RBP26.29■■□□□ 1.8
PVT1-204ENST00000517525 DDR2Q16832 855 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 FOXR2Q6PJQ5 311 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 ARID3BQ8IVW6 561 aaPredicted RBP26.29■■□□□ 1.8
PVT1-204ENST00000517525 MYLPFQ96A32 169 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 PCED1BQ96HM7 432 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 GCNAQ96QF7 691 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 SLITRK6Q9H5Y7 841 aa26.29■■□□□ 1.8
PVT1-204ENST00000517525 GADD45BO75293 160 aaPredicted RBP26.28■■□□□ 1.8
PVT1-204ENST00000517525 VIPR2P41587 438 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 CDR1P51861 262 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 LRRC63Q05C16 580 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 PPP3CAQ08209 521 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 FCHO2Q0JRZ9 810 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 TCF15Q12870 199 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 MLF2Q15773 248 aaPredicted RBP26.28■■□□□ 1.8
PVT1-204ENST00000517525 STXBP5Q5T5C0 1151 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 GPR158Q5T848 1215 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 IRF7Q92985 503 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 OSBPL6Q9BZF3 934 aa26.28■■□□□ 1.8
PVT1-204ENST00000517525 SLC38A8A6NNN8 435 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 HEPACAM2A8MVW5 462 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 A8MXQ7 604 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 PI15O43692 258 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 HLA-DRAP01903 254 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 MLLT6P55198 1093 aaPredicted RBP26.27■■□□□ 1.8
PVT1-204ENST00000517525 FKBP3Q00688 224 aaKnown RBP26.27■■□□□ 1.8
PVT1-204ENST00000517525 B3GALNT2Q8NCR0 500 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 DHTKD1Q96HY7 919 aaPredicted RBP26.27■■□□□ 1.8
PVT1-204ENST00000517525 FAXDC2Q96IV6 333 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 C8orf48Q96LL4 319 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 TSG101Q99816 390 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 SMYD3Q9H7B4 428 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 TMEM8AQ9HCN3 771 aa26.27■■□□□ 1.8
PVT1-204ENST00000517525 SLC16A3O15427 465 aaKnown RBP26.26■■□□□ 1.79
PVT1-204ENST00000517525 MDH1BQ5I0G3 518 aa26.26■■□□□ 1.79
PVT1-204ENST00000517525 MON1AQ86VX9 555 aa26.26■■□□□ 1.79
PVT1-204ENST00000517525 ERCC4Q92889 916 aaPredicted RBP26.26■■□□□ 1.79
PVT1-204ENST00000517525 RSPRY1Q96DX4 576 aa26.26■■□□□ 1.79
PVT1-204ENST00000517525 SLC46A2Q9BY10 475 aa26.26■■□□□ 1.79
PVT1-204ENST00000517525 BRD9Q9H8M2 597 aa26.26■■□□□ 1.79
PVT1-204ENST00000517525 MAN1B1Q9UKM7 699 aa26.26■■□□□ 1.79
PVT1-204ENST00000517525 NCANO14594 1321 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 KANSL1LA0AUZ9 987 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 ARNTLO00327 626 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 TRIM66O15016 1216 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 CHADO15335 359 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 STX10O60499 249 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 TRIM49P0CI25 452 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 TRIM49CP0CI26 452 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 EPB41P11171 864 aaKnown RBP26.25■■□□□ 1.79
PVT1-204ENST00000517525 BDNFP23560 247 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 GCLMP48507 274 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 UBE2HP62256 183 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 NHLH1Q02575 133 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 SDHAF4Q5VUM1 108 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 ANKRD40Q6AI12 368 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 UNC93AQ86WB7 457 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 CCDC105Q8IYK2 499 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 CMTM8Q8IZV2 173 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 TNIP3Q96KP6 325 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 NELL2Q99435 816 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 BCO2Q9BYV7 579 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 ELOVL4Q9GZR5 314 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 SDCBP2Q9H190 292 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 DLGAP2Q9P1A6 1054 aa26.25■■□□□ 1.79
PVT1-204ENST00000517525 PIEZO1Q92508 2521 aa26.24■■□□□ 1.79
PVT1-204ENST00000517525 GLULP15104 373 aa26.24■■□□□ 1.79
PVT1-204ENST00000517525 CCNE1P24864 410 aa26.24■■□□□ 1.79
PVT1-204ENST00000517525 PIK3CAP42336 1068 aa26.24■■□□□ 1.79
PVT1-204ENST00000517525 ASPAP45381 313 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms