RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PCDHA10Q9Y5I2 948 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 GMNNO75496 209 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 DGAT1O75907 488 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 ASMTLO95671 621 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 MCF2P10911 925 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PYGBP11216 843 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 GARTP22102 1010 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 CDH6P55285 790 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 RHBDL3P58872 404 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 CYP24A1Q07973 514 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PDE1CQ14123 709 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF699Q32M78 642 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 C4orf22Q6V702 233 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 C15orf52Q6ZUT6 534 aaKnown RBP6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PALB2Q86YC2 1186 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 ABRAQ8N0Z2 381 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 FAM71DQ8N9W8 422 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 CYP2W1Q8TAV3 490 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 SPATA18Q8TC71 538 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PWWP2AQ96N64 755 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 CRAMP1Q96RY5 1269 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PHACTR1Q9C0D0 580 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 GABBR1Q9UBS5 961 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 AJAP1Q9UKB5 411 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-203ENST00000517490 USP20Q9Y2K6 914 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 HEY1Q9Y5J3 304 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 GAKO14976 1311 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 CAMTA1Q9Y6Y1 1673 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 NUP188Q5SRE5 1749 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PARP4Q9UKK3 1724 aaKnown RBP6.96□□□□□ -1.3
CPNE3-203ENST00000517490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 LIASO43766 372 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 OTUD4Q01804 1114 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 NCOA4Q13772 614 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 PPP2R5DQ14738 602 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 C2CD6Q53TS8 623 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 FAM160B1Q5W0V3 765 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 CIAPIN1Q6FI81 312 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 RAPH1Q70E73 1250 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 MARK2Q7KZI7 788 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 HSD17B14Q9BPX1 270 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 UPF3AQ9H1J1 476 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 CCDC68Q9H2F9 335 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 KCNH7Q9NS40 1196 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SEPT10Q9P0V9 454 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 HERC5Q9UII4 1024 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 LNPEPQ9UIQ6 1025 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ARHGAP26Q9UNA1 814 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SORCS3Q9UPU3 1222 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 NWD2Q9ULI1 1742 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 TMCC1O94876 653 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 CLPTM1O96005 669 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ANPEPP15144 967 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SSTR1P30872 391 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 FOXN2P32314 431 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 RPS6KA3P51812 740 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SLC18A1P54219 525 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 KRT72Q14CN4 511 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 TMEM259Q4ZIN3 620 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 RNF220Q5VTB9 566 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ANO7Q6IWH7 933 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 C12orf56Q8IXR9 622 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ALLCQ8N6M5 410 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ASCC2Q9H1I8 757 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 MYH6P13533 1939 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 MYH7P12883 1935 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 F8W8V4 182 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 APOL1O14791 398 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 KCNN4O15554 427 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 LSM8O95777 96 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ARP10275 920 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 HSPA8P11142 646 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 TYK2P29597 1187 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ARL4AP40617 200 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 RGS2P41220 211 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 KPNA2P52292 529 aaKnown RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 IFRD2Q12894 506 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 KLC3Q6P597 504 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 MFSD7Q6UXD7 560 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ZBTB33Q86T24 672 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF333Q96JL9 665 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ECSITQ9BQ95 431 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SH2D3AQ9BRG2 576 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF518BQ9C0D4 1074 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ARL8BQ9NVJ2 186 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ARMCX1Q9P291 453 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 SLC4A7Q9Y6M7 1214 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 H0YIN7 160 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 PPP1R11O60927 126 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 PSMD10O75832 226 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 RTN3O95197 1032 aaPredicted RBP6.95□□□□□ -1.3
CPNE3-203ENST00000517490 APRTP07741 180 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 NPR1P16066 1061 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 PTP4A2Q12974 167 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 GEN1Q17RS7 908 aa6.95□□□□□ -1.3
CPNE3-203ENST00000517490 ACBD5Q5T8D3 534 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms