RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 CDC5LQ99459 802 aaKnown RBP-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 GPRC5DQ9NZD1 345 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 HDAC6Q9UBN7 1215 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 ANAPC4Q9UJX5 808 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 IKZF3Q9UKT9 509 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 SRPK3Q9UPE1 567 aa-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.62□□□□□ -2.51
SNORA40.16-201ENST00000517238 CLEC18AA5D8T8 446 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 KLHL33A6NCF5 533 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 E9PQ18 207 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 P2RY10O00398 339 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 FSBPO95073 299 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 NXPH3O95157 252 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 CRYAAP02489 173 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 DPEP1P16444 411 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 NR1D1P20393 614 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 CYP2C18P33260 490 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 CPA2P48052 419 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 RFX2P48378 723 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 HNRNPMP52272 730 aaKnown RBP eCLIP-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 UCNP55089 124 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 RAP2BP61225 183 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 FAM160A1Q05DH4 1040 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRSS53Q2L4Q9 553 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 KRTAP6-1Q3LI64 71 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 PREPLQ4J6C6 727 aaPredicted RBP-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 KIRREL2Q6UWL6 708 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 SLC39A11Q8N1S5 342 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 LYPD1Q8N2G4 141 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRR26Q8N8Z3 221 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 GOLM1Q8NBJ4 401 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 CLEC18CQ8NCF0 446 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 IL27Q8NEV9 243 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 ASB15Q8WXK1 588 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 USP13Q92995 863 aaPredicted RBP-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 FERMT2Q96AC1 680 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 FKBP10Q96AY3 582 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 C2orf48Q96LS8 159 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 GBP4Q96PP9 640 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 RTN4RQ9BZR6 473 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 IL25Q9H293 177 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 POFUT1Q9H488 388 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 IL21RQ9HBE5 538 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 KCMF1Q9P0J7 381 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 DKK3Q9UBP4 350 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF214Q9UL59 606 aaPredicted RBP-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 AGAP1Q9UPQ3 857 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 SPG7Q9UQ90 795 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 MMACHCQ9Y4U1 282 aa-0.63□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNFX1Q9P2E3 1918 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 NID2Q14112 1375 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 H7C423 109 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 EXOC3O60645 756 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 EDN1P05305 212 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 GAAP10253 952 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ARP10275 920 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 TRIM27P14373 513 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 PTGER3P43115 390 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 RPS7P62081 194 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 RAE1P78406 368 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 CLCQ05315 142 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 RUNX1T1Q06455 604 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 PDE4CQ08493 712 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 PLCB4Q15147 1175 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 TESK1Q15569 626 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 SNAI3Q3KNW1 292 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 CD300EQ496F6 205 aaPredicted RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 NUGGCQ68CJ6 796 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 SLC26A9Q7LBE3 791 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ADGRD2Q7Z7M1 963 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 HCAR2Q8TDS4 363 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 FBF1Q8TES7 1133 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 JPH3Q8WXH2 748 aaPredicted RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ERCC4Q92889 916 aaPredicted RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF653Q96CK0 615 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 MARS2Q96GW9 593 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 POM121Q96HA1 1249 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 CNOT6LQ96LI5 555 aaKnown RBP-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 MED15Q96RN5 788 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 TRIM51Q9BSJ1 452 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 DCLK3Q9C098 648 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF700Q9H0M5 742 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF446Q9NWS9 450 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 HSFX1Q9UBD0 423 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 SYNPO2Q9UMS6 1093 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 MTMR7Q9Y216 660 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 EMC9Q9Y3B6 208 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 ASB1Q9Y576 335 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 COL7A1Q02388 2944 aa-0.64□□□□□ -2.51
SNORA40.16-201ENST00000517238 IGKV1D-17A0A075B6S4 117 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRAMEF33A0A0G2JMD5 474 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 A0A1W2PS29 197 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 TCRBV5S4A2TA0A5A2 114 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 CBX4O00257 560 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 NOP56O00567 594 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ARHGEF9O43307 516 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 RAD21O60216 631 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 FGF17O60258 216 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PRAMEF10O60809 474 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 CPA1P15085 419 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms