RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PRR23CQ6ZRP0 262 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DPH6Q7L8W6 267 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SPATA2LQ8IUW3 424 aaPredicted RBP15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GPD1LQ8N335 351 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CPA6Q8N4T0 437 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CXorf38Q8TB03 319 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 NOC3LQ8WTT2 800 aaKnown RBP15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CBWD1Q9BRT8 395 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MTMR12Q9C0I1 747 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ZSCAN16Q9H4T2 348 aaPredicted RBP15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 EBF3Q9H4W6 596 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PDE11AQ9HCR9 933 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CCL26Q9Y258 94 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SNX9Q9Y5X1 595 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TRAV19A0A0A6YYK7 116 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GOLGA8IPA6NC78 632 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GOLGA8JA6NMD2 632 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GABRDO14764 452 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TADA3O75528 432 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TNNC2P02585 160 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 USP17L7P0C7H9 530 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DRD1P21728 446 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ACAT1P24752 427 aaKnown RBP15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CYP2F1P24903 491 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MAGEA11P43364 429 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PDE6CP51160 858 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FAM160A1Q05DH4 1040 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 USP4Q13107 963 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SRSF5Q13243 272 aaKnown RBP15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MTF1Q14872 753 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MAPRE1Q15691 268 aaKnown RBP15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DDR2Q16832 855 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FBXO43Q4G163 708 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FSTL4Q6MZW2 842 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FAM173BQ6P4H8 233 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 C4orf50Q6ZRC1 276 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FAM160A2Q8N612 972 aaPredicted RBP15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FSIP1Q8NA03 581 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ZSWIM2Q8NEG5 633 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 LOXL4Q96JB6 756 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CEP295NLQ96MC4 621 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 USP28Q96RU2 1077 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TNMDQ9H2S6 317 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CUEDC2Q9H467 287 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 KIAA1586Q9HCI6 787 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SIX4Q9UIU6 781 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GTF3C4Q9UKN8 822 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SLC8A2Q9UPR5 921 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GREB1Q4ZG55 1949 aa15.66■□□□□ 0.1
SCARNA20.5-201ENST00000516991 HELZP42694 1942 aaKnown RBP15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 A0A087X0B3 334 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ZNF233A6NK53 670 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 AKAP3O75969 853 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CKMP06732 381 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ARSAP15289 507 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ZNF77Q15935 545 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SDHAF4Q5VUM1 108 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TRIM68Q6AZZ1 485 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 OSTM1Q86WC4 334 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 STKLD1Q8NE28 680 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GAB3Q8WWW8 586 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ATP2A3Q93084 1043 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FGFBP2Q9BYJ0 223 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PCIF1Q9H4Z3 704 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TRPC7Q9HCX4 862 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 INTS13Q9NVM9 706 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 C2orf42Q9NWW7 574 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CDH9Q9ULB4 789 aa15.65■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ANAPC1Q9H1A4 1944 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 ACACBO00763 2458 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 RPP40O75818 363 aaKnown RBP15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 PRPF6O94906 941 aaKnown RBP15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 TCF3P15923 654 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 PFKLP17858 780 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 IFNAR2P48551 515 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 NASPP49321 788 aaPredicted RBP15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 KCNB1Q14721 858 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 STK38Q15208 465 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 DUOXA2Q1HG44 320 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 SOWAHAQ2M3V2 549 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 VSTM1Q6UX27 236 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 CACNA2D4Q7Z3S7 1137 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 WDR49Q8IV35 697 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 SCN4BQ8IWT1 228 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 CAMKK1Q8N5S9 505 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 OSCP1Q8WVF1 389 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 DDX1Q92499 740 aaKnown RBP15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 ACDQ96AP0 544 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 HPDLQ96IR7 371 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 P2RY13Q9BPV8 354 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 SYT15Q9BQS2 421 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 EHD2Q9NZN4 543 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 MTMR6Q9Y217 621 aa15.64■□□□□ 0.09
SCARNA20.5-201ENST00000516991 PTPRDP23468 1912 aa15.63■□□□□ 0.09
SCARNA20.5-201ENST00000516991 DCDC2BA2VCK2 349 aa15.63■□□□□ 0.09
SCARNA20.5-201ENST00000516991 OTOL1A6NHN0 477 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms