RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SEPT8Q92599 483 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 GOLGA1Q92805 767 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 ARMC5Q96C12 935 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 RHOXF2Q9BQY4 288 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 FAM124BQ9H5Z6 455 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-213ENST00000515418 MRPL47Q9HD33 250 aaKnown RBP9.68□□□□□ -0.86
CPNE4-213ENST00000515418 TBC1D13Q9NVG8 400 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 DDX43Q9NXZ2 648 aaKnown RBP9.68□□□□□ -0.86
CPNE4-213ENST00000515418 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 PCDHB7Q9Y5E2 793 aa9.68□□□□□ -0.86
CPNE4-213ENST00000515418 F8VP50 259 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 TCF4P15884 667 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 TKTP29401 623 aaKnown RBP9.67□□□□□ -0.86
CPNE4-213ENST00000515418 PAFAH1B1P43034 410 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 RBM10P98175 930 aaKnown RBP9.67□□□□□ -0.86
CPNE4-213ENST00000515418 TAF5Q15542 800 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 CFAP221Q4G0U5 840 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 MDH1BQ5I0G3 518 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 DNAJC24Q6P3W2 148 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 DCUN1D2Q6PH85 259 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 ADAT2Q7Z6V5 191 aaKnown RBP9.67□□□□□ -0.86
CPNE4-213ENST00000515418 EMC1Q8N766 993 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 SPATA4Q8NEY3 305 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 JOSD2Q8TAC2 188 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 SLC35F5Q8WV83 523 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 CD101Q93033 1021 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 PIWIL1Q96J94 861 aaKnown RBP9.67□□□□□ -0.86
CPNE4-213ENST00000515418 TOX2Q96NM4 488 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 AP1M1Q9BXS5 423 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 B3GNT5Q9BYG0 378 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 RBM12Q9NTZ6 932 aaKnown RBP9.67□□□□□ -0.86
CPNE4-213ENST00000515418 TMEM39AQ9NV64 488 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 TMEM161AQ9NX61 479 aa9.67□□□□□ -0.86
CPNE4-213ENST00000515418 MYBPHLA2RUH7 354 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 E5RJQ4 531 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 GRAP2O75791 330 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 BEST1O76090 585 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PROSCO94903 275 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 UPP2O95045 317 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 HSPA1AP0DMV8 641 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 HSPA1BP0DMV9 641 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 KRT3P12035 628 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ITGB8P26012 769 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 GABRB2P47870 512 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 OR1G1P47890 313 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 CKAP4Q07065 602 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ZNF252P-AS1Q0IIN9 211 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 OR6B2Q6IFH4 312 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 DCLRE1AQ6PJP8 1040 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PAQR9Q6ZVX9 377 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 FUKQ8N0W3 1084 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 VWCEQ96DN2 955 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PBKQ96KB5 322 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 RTP3Q9BQQ7 232 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PLEKHA4Q9H4M7 779 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 CRTAC1Q9NQ79 661 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 HESX1Q9UBX0 185 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PRG3Q9Y2Y8 225 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PCDHA3Q9Y5H8 950 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 SCINQ9Y6U3 715 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 SIGLEC16A6NMB1 481 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 INPPL1O15357 1258 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 FGGP02679 453 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PYGMP11217 842 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 BCAR1P56945 870 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 TAS2R40P59535 323 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 DSC1Q08554 894 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ZNF268Q14587 947 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 STILQ15468 1287 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ATP13A4Q4VNC1 1196 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ARHGAP17Q68EM7 881 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 PPP1R2P3Q6NXS1 205 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 TMCO2Q7Z6W1 182 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 COLGALT2Q8IYK4 626 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ABI1Q8IZP0 508 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 CRIPAKQ8N1N5 446 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 ANKRD52Q8NB46 1076 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 C3orf20Q8ND61 904 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 RSPH1Q8WYR4 309 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 TNIP3Q96KP6 325 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 CALR3Q96L12 384 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 CASD1Q96PB1 797 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 FAM193BQ96PV7 902 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 TMEM209Q96SK2 561 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 SELENOOQ9BVL4 669 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 RHOBTB2Q9BYZ6 727 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 MIS12Q9H081 205 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 METTL5Q9NRN9 209 aaKnown RBP9.66□□□□□ -0.86
CPNE4-213ENST00000515418 TBX21Q9UL17 535 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 LRFN2Q9ULH4 789 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 NR2E1Q9Y466 385 aa9.66□□□□□ -0.86
CPNE4-213ENST00000515418 NT5C1B-RDH14C9J2C7 533 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 CXCL10P02778 98 aa9.65□□□□□ -0.86
CPNE4-213ENST00000515418 LCP1P13796 627 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms