RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MRGPREQ86SM8 312 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 ARHGEF19Q8IW93 802 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 FAM109AQ8N4B1 249 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 ASB10Q8WXI3 467 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 BRI3BPQ8WY22 251 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 XPNPEP3Q9NQH7 507 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 TBC1D23Q9NUY8 699 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
HMGCS1-207ENST00000514610 TRGV11A0A075B6L2 103 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 A0A087WZ62 844 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 A0A0B4J269 797 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 F5H697 171 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 FOSP01100 380 aaPredicted RBP6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 A1BGP04217 495 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 ADRB1P08588 477 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 SETSIPP0DME0 302 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 BTF3P20290 206 aaKnown RBP6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 ACVR2AP27037 513 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 IL6STP40189 918 aaPredicted RBP6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 HNRNPMP52272 730 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 GUCY1B3Q02153 619 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 MYO1EQ12965 1108 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 OS9Q13438 667 aaPredicted RBP6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 TUBB3Q13509 450 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 NPY5RQ15761 445 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 IGFL4Q6B9Z1 124 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 LAYNQ6UX15 382 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 RNF44Q7L0R7 432 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 SLC30A5Q8TAD4 765 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 HAS1Q92839 578 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 PPP1R9BQ96SB3 815 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 ARPC5LQ9BPX5 153 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 PTDSS2Q9BVG9 487 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 VPS11Q9H270 941 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 PLCB1Q9NQ66 1216 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 SERHLQ9NQF3 203 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 ZNF212Q9UDV6 495 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 CDC23Q9UJX2 597 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 SSX2IPQ9Y2D8 614 aa6.22□□□□□ -1.41
HMGCS1-207ENST00000514610 LOC102723971A0A1B0GUV8 181 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 RAB27BO00194 218 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 THAP12O43422 761 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 PPP3CBP16298 524 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 KCNA3P22001 575 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 IL1R2P27930 398 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 CD6P30203 668 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 PPM1AP35813 382 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 DGKEP52429 567 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 SP2Q02086 613 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 KRT17Q04695 432 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 MPEG1Q2M385 716 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 LSM12Q3MHD2 195 aaKnown RBP6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 ARL13BQ3SXY8 428 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 ARHGAP40Q5TG30 622 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 COLGALT2Q8IYK4 626 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 VGLL2Q8N8G2 317 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 ACRBPQ8NEB7 543 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 VPS37AQ8NEZ2 397 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 BPIFB1Q8TDL5 484 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 SSH3Q8TE77 659 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 LPIN2Q92539 896 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 OSBPL9Q96SU4 736 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 GPR20Q99678 358 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 GDF15Q99988 308 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 AMBRA1Q9C0C7 1298 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 INTS13Q9NVM9 706 aa6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 DNMT3BQ9UBC3 853 aaKnown RBP6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 NDRG4Q9ULP0 352 aaKnown RBP6.21□□□□□ -1.42
HMGCS1-207ENST00000514610 CLCA1A8K7I4 914 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 RRP9O43818 475 aaKnown RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 CSF1RP07333 972 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 EGR2P11161 476 aaPredicted RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 PPIFP30405 207 aaKnown RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 LRPAP1P30533 357 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 PTGS2P35354 604 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 PTDSS1P48651 473 aaKnown RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 HSPA7P48741 367 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 ARHGEF7Q14155 803 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 SLC29A2Q14542 456 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 SF3B3Q15393 1217 aaKnown RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 PTCHD3Q3KNS1 767 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 MGAT5BQ3V5L5 792 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 RGS7BPQ6MZT1 257 aaPredicted RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 C1orf228Q6PIY5 440 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 CATSPERGQ6ZRH7 1159 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 YAF2Q8IY57 180 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 SYNE4Q8N205 404 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 SDR16C5Q8N3Y7 309 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 PROKR1Q8TCW9 393 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 LRRC46Q96FV0 321 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 ZNF747Q9BV97 191 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 WDR11Q9BZH6 1224 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 DHX36Q9H2U1 1008 aaKnown RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 REXO2Q9Y3B8 237 aaKnown RBP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 CDY1Q9Y6F8 540 aa6.2□□□□□ -1.42
HMGCS1-207ENST00000514610 AREL1O15033 823 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 CCP110O43303 1012 aa6.19□□□□□ -1.42
HMGCS1-207ENST00000514610 TRIAP1O43715 76 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms