RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 GLULP15104 373 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 BDNFP23560 247 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 NR2F2P24468 414 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 RAP1GAPP47736 663 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 NLRP12P59046 1061 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 NCOA4Q13772 614 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 ZNF699Q32M78 642 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 FAM171BQ6P995 826 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 SCARA5Q6ZMJ2 495 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 C4orf50Q6ZRC1 276 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 LIMS2Q7Z4I7 341 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 SLC9A9Q8IVB4 645 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 MAB21L3Q8N8X9 362 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 TTC16Q8NEE8 873 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 DEPDC1BQ8WUY9 529 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
DDR1-275ENST00000514434 SYAP1Q96A49 352 aaPredicted RBP13.96□□□□□ -0.17
DDR1-275ENST00000514434 CCDC34Q96HJ3 373 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 XYLT2Q9H1B5 865 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 DPEP3Q9H4B8 488 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 TASP1Q9H6P5 420 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 ABCB6Q9NP58 842 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 LTB4R2Q9NPC1 389 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 NDRG2Q9UN36 371 aaKnown RBP13.96□□□□□ -0.17
DDR1-275ENST00000514434 NME7Q9Y5B8 376 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 A8MXQ7 604 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 VNN1O95497 513 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 F11P03951 625 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
DDR1-275ENST00000514434 TARSP26639 723 aaKnown RBP13.95□□□□□ -0.18
DDR1-275ENST00000514434 GRIK1P39086 918 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 CDH8P55286 799 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 CFAP221Q4G0U5 840 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 ZNF667Q5HYK9 610 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 ZNF852Q6ZMS4 543 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 TMEM150AQ86TG1 271 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 FMR1NBQ8N0W7 255 aaPredicted RBP13.95□□□□□ -0.18
DDR1-275ENST00000514434 DNASE1L2Q92874 299 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 E2F7Q96AV8 911 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 EEF2KMTQ96G04 330 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 FUBP3Q96I24 572 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDR1-275ENST00000514434 DDX23Q9BUQ8 820 aaKnown RBP13.95□□□□□ -0.18
DDR1-275ENST00000514434 BCO2Q9BYV7 579 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 MMRN2Q9H8L6 949 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 DLGAP2Q9P1A6 1054 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 PIAS3Q9Y6X2 628 aa13.95□□□□□ -0.18
DDR1-275ENST00000514434 MIA3Q5JRA6 1907 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 TICRRQ7Z2Z1 1910 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 TACC1O75410 805 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 TRIM49P0CI25 452 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 TRIM49CP0CI26 452 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
DDR1-275ENST00000514434 ATICP31939 592 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 AVPR1AP37288 418 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 SOX9P48436 509 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 VAMP7P51809 220 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 AP3M2P53677 418 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 ADAM9Q13443 819 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 KCNB1Q14721 858 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
DDR1-275ENST00000514434 FRMD5Q7Z6J6 570 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 GUF1Q8N442 669 aaKnown RBP13.94□□□□□ -0.18
DDR1-275ENST00000514434 MYCBPAPQ8TBZ2 947 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 CSGALNACT1Q8TDX6 532 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 MRPS31Q92665 395 aaKnown RBP13.94□□□□□ -0.18
DDR1-275ENST00000514434 PCED1BQ96HM7 432 aa13.94□□□□□ -0.18
DDR1-275ENST00000514434 SPATA6Q9NWH7 488 aaPredicted RBP13.94□□□□□ -0.18
DDR1-275ENST00000514434 ZNF638Q14966 1978 aaKnown RBP13.94□□□□□ -0.18
DDR1-275ENST00000514434 CLDN5O00501 218 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 CHADO15335 359 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 AKAP3O75969 853 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 NOL4O94818 638 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 STAU1O95793 577 aaKnown RBP13.93□□□□□ -0.18
DDR1-275ENST00000514434 KRT13P13646 458 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 CCNE1P24864 410 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
DDR1-275ENST00000514434 ANXA13P27216 316 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 MAGEA11P43364 429 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 GCLMP48507 274 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 KPNA1P52294 538 aaPredicted RBP13.93□□□□□ -0.18
DDR1-275ENST00000514434 CLDN10P78369 228 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 FAM160A1Q05DH4 1040 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 FCHO2Q0JRZ9 810 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
DDR1-275ENST00000514434 ORC1Q13415 861 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 ZACNQ401N2 412 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 C1orf220Q5T0J3 134 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 SPOPLQ6IQ16 392 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 SV2AQ7L0J3 742 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 C1orf210Q8IVY1 113 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 FAM186BQ8IYM0 893 aa13.93□□□□□ -0.18
DDR1-275ENST00000514434 CMTM8Q8IZV2 173 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms