RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 ACOT1Q86TX2 421 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 ZNF677Q86XU0 584 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 SPATA2LQ8IUW3 424 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-214ENST00000513989 RBBP8NLQ8NC74 664 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-214ENST00000513989 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 KAT5Q92993 513 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 B3GALT6Q96L58 329 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 SYT15Q9BQS2 421 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 TTYH3Q9C0H2 523 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 CLDND1Q9NY35 253 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 MTRRQ9UBK8 725 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 CEP83Q9Y592 693 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 IRAK3Q9Y616 596 aa10.79□□□□□ -0.68
NEDD9-214ENST00000513989 LRRC53A6NM62 1247 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 TBC1D4O60343 1298 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 LILRB3O75022 631 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 CSPG5O95196 566 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 GYPCP04921 128 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PTMAP06454 111 aaKnown RBP10.78□□□□□ -0.68
NEDD9-214ENST00000513989 CPB1P15086 417 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ACAT1P24752 427 aaKnown RBP10.78□□□□□ -0.68
NEDD9-214ENST00000513989 KLRC2P26717 231 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 GNA15P30679 374 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 OR1D2P34982 312 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 IRS1P35568 1242 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 NDUFV1P49821 464 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PDE6CP51160 858 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ZNF132P52740 706 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 RAD23BP54727 409 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ERVFC1P60507 584 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 CYP27A1Q02318 531 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 KLHL30Q0D2K2 578 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 TBX2Q13207 712 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-214ENST00000513989 GPR17Q13304 367 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 RAB33AQ14088 237 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PTPN14Q15678 1187 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 CNGA2Q16280 664 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PLPP4Q5VZY2 271 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 SLC8B1Q6J4K2 584 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PRSS55Q6UWB4 352 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-214ENST00000513989 OSTM1Q86WC4 334 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 UBR7Q8N806 425 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 SLC4A11Q8NBS3 891 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ZNF461Q8TAF7 563 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 BAP1Q92560 729 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 FAM122AQ96E09 287 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 CYFIP2Q96F07 1278 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 MED10Q9BTT4 135 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 VN1R3Q9BXE9 311 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ELOVL4Q9GZR5 314 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ZCWPW1Q9H0M4 648 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 HESX1Q9UBX0 185 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PCDHB5Q9Y5E4 795 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 PCDHGC5Q9Y5F6 944 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
NEDD9-214ENST00000513989 C2orf71A6NGG8 1288 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 FSCN2O14926 492 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 THAP12O43422 761 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 MBTPS2O43462 519 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 SERPING1P05155 500 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 CYP11B1P15538 503 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 TNFAIP3P21580 790 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 CLCN1P35523 988 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 TUFMP49411 452 aaKnown RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 ADKP55263 362 aaKnown RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 SNX16P57768 344 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 PSMC1P62191 440 aaKnown RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 SMAD2Q15796 467 aaKnown RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 CLUL1Q15846 466 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 PUS10Q3MIT2 529 aaKnown RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 SLC39A12Q504Y0 691 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 MDH1BQ5I0G3 518 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 RTL10Q7L3V2 364 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 SPPL2BQ8TCT7 592 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 ZNF606Q8WXB4 792 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 MSLNLQ96KJ4 702 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 NOX5Q96PH1 765 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 PANX2Q96RD6 677 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 DNAJC7Q99615 494 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 CDCA3Q99618 268 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 HNRNPABQ99729 332 aaKnown RBP10.77□□□□□ -0.69
NEDD9-214ENST00000513989 CLSTN3Q9BQT9 956 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 TLE6Q9H808 572 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 ABCB6Q9NP58 842 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 HSFX1Q9UBD0 423 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 GTF3C4Q9UKN8 822 aa10.77□□□□□ -0.69
NEDD9-214ENST00000513989 WDR87Q6ZQQ6 2873 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 MYBPHLA2RUH7 354 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 RNF225M0QZC1 329 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-214ENST00000513989 TEX28O15482 410 aa10.76□□□□□ -0.69
NEDD9-214ENST00000513989 NCK2O43639 380 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms