RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KBTBD7Q8WVZ9 684 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 PPP1R10Q96QC0 940 aaKnown RBP15.77■□□□□ 0.11
VCAN-211ENST00000513984 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 DPH5Q9H2P9 285 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 METTL5Q9NRN9 209 aaKnown RBP15.77■□□□□ 0.11
VCAN-211ENST00000513984 FAM105AQ9NUU6 356 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 SPTLC1O15269 473 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 PSMA2P25787 234 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 GGCXP38435 758 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 DPH6Q7L8W6 267 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 CCDC105Q8IYK2 499 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 OR6B3Q8NGW1 331 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 SLITRK1Q96PX8 696 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 GOLGA2P5Q9HBQ8 144 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 HOMER3Q9NSC5 361 aa15.76■□□□□ 0.11
VCAN-211ENST00000513984 DDX56Q9NY93 547 aaKnown RBP15.76■□□□□ 0.11
VCAN-211ENST00000513984 GPR182O15218 404 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 HSF2BPO75031 334 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 HOXD10P28358 340 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 GBP1P32455 592 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 PTPN7P35236 360 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 GJC1P36383 396 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 CETN2P41208 172 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 COPS2P61201 443 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 NFX1Q12986 1120 aaKnown RBP15.75■□□□□ 0.11
VCAN-211ENST00000513984 ACAP1Q15027 740 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 PTGISQ16647 500 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 TTC30AQ86WT1 665 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 HACE1Q8IYU2 909 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 CRYBG2Q8N1P7 616 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 LRRC45Q96CN5 670 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 DCLK3Q9C098 648 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 ZDHHC18Q9NUE0 388 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 A8MXQ7 604 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 POLR3GO15318 223 aaPredicted RBP15.75■□□□□ 0.11
VCAN-211ENST00000513984 LRCH4O75427 683 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 ECEL1O95672 775 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 KRT1P04264 644 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 FGFR1P11362 822 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 LILRA4P59901 499 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 SLC25A11Q02978 314 aaKnown RBP15.75■□□□□ 0.11
VCAN-211ENST00000513984 LLGL1Q15334 1064 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 ATP13A4Q4VNC1 1196 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 ANKS1BQ7Z6G8 1248 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 IQCKQ8N0W5 287 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 APPL2Q8NEU8 664 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 C1orf54Q8WWF1 131 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 ZFP42Q96MM3 310 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 SH3GL2Q99962 352 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 TRIM31Q9BZY9 425 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 CREBZFQ9NS37 354 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 CHST7Q9NS84 486 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 FAM49BQ9NUQ9 324 aa15.75■□□□□ 0.11
VCAN-211ENST00000513984 DDX20Q9UHI6 824 aaKnown RBP15.75■□□□□ 0.11
VCAN-211ENST00000513984 DNAH12Q6ZR08 3092 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 TSC2P49815 1807 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 E5RJQ4 531 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 CABYRO75952 493 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 THPOP40225 353 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 KCNJ1P48048 391 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 KCTD19Q17RG1 926 aaPredicted RBP15.74■□□□□ 0.11
VCAN-211ENST00000513984 FAM102AQ5T9C2 384 aaPredicted RBP15.74■□□□□ 0.11
VCAN-211ENST00000513984 TXNRD3NBQ6F5E7 133 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 ARFGAP1Q8N6T3 406 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 EMC1Q8N766 993 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 GSTCDQ8NEC7 633 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 CD99L2Q8TCZ2 262 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 STK32AQ8WU08 396 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 SLC35F5Q8WV83 523 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 PIK3R5Q8WYR1 880 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 RNF25Q96BH1 459 aaPredicted RBP15.74■□□□□ 0.11
VCAN-211ENST00000513984 ZIM3Q96PE6 472 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 TRAIPQ9BWF2 469 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 HEMGNQ9BXL5 484 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 SLC4A5Q9BY07 1137 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 DPEP3Q9H4B8 488 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 AGO3Q9H9G7 860 aaKnown RBP15.74■□□□□ 0.11
VCAN-211ENST00000513984 SLC38A7Q9NVC3 462 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 GRHL1Q9NZI5 618 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 HESX1Q9UBX0 185 aa15.74■□□□□ 0.11
VCAN-211ENST00000513984 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.74■□□□□ 0.11
VCAN-211ENST00000513984 MEIS3P2A8K0S8 358 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 FAM163BP0C2L3 166 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 WARSP23381 471 aaKnown RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 GNL1P36915 607 aaPredicted RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 RPL21P46778 160 aaKnown RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 PTK7Q13308 1070 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 CCNG2Q16589 344 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 CFAP58Q5T655 872 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 PMF1Q6P1K2 205 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 ZDHHC24Q6UX98 284 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 MFSD7Q6UXD7 560 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 SPOCD1Q6ZMY3 1216 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 FAM183BPQ6ZVS7 135 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 SYDE1Q6ZW31 735 aaPredicted RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 TMC3Q7Z5M5 1100 aa15.73■□□□□ 0.11
VCAN-211ENST00000513984 MRPL10Q7Z7H8 261 aaKnown RBP15.73■□□□□ 0.11
VCAN-211ENST00000513984 RNF180Q86T96 592 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms