RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CHST7Q9NS84 486 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 SPTLC3Q9NUV7 552 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 MTRRQ9UBK8 725 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 TSPAN16Q9UKR8 245 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 BACE2Q9Y5Z0 518 aa11.51□□□□□ -0.57
PFDN1-204ENST00000512707 A0A087X0T9 212 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 GRXCR1A8MXD5 290 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 C5orf67F2Z3F1 127 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 C2CD2LO14523 706 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 RTN2O75298 545 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 MICAL2O94851 1124 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 FAM228BP0C875 321 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 FAM200BP0CF97 657 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 ADORA2BP29275 332 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 ARPP19P56211 112 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 FMO1Q01740 532 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 GFPT1Q06210 699 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 BST2Q10589 180 aaKnown RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 MRPL58Q14197 206 aaKnown RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 CLEC16AQ2KHT3 1053 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 ASTE1Q2TB18 679 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 SLC39A12Q504Y0 691 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 RTP2Q5QGT7 225 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 LIN9Q5TKA1 542 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 RAD9BQ6WBX8 426 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 PASD1Q8IV76 773 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 C12orf29Q8N999 325 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 ANKRD52Q8NB46 1076 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 C2orf15Q8WU43 125 aaKnown RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 TFAP2BQ92481 460 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 SMARCD1Q96GM5 515 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 FUBP3Q96I24 572 aaKnown RBP eCLIP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 B3GALT6Q96L58 329 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 HNRNPABQ99729 332 aaKnown RBP11.5□□□□□ -0.57
PFDN1-204ENST00000512707 SYT11Q9BT88 431 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 EMILIN2Q9BXX0 1053 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 TSGA10Q9BZW7 698 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 ZCWPW1Q9H0M4 648 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 SYNCQ9H7C4 482 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 ENTPD7Q9NQZ7 604 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 NAGPAQ9UK23 515 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 GTF3C4Q9UKN8 822 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 PCDHB5Q9Y5E4 795 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 TSC2P49815 1807 aa11.5□□□□□ -0.57
PFDN1-204ENST00000512707 GOLGA6L9A6NEM1 432 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 DDX3XO00571 662 aaKnown RBP eCLIP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 HCRTO43612 131 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 ATP2C2O75185 946 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 LCA5LO95447 670 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 EFEMP2O95967 443 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CALCAP01258 141 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CALB1P05937 261 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MYBL1P10243 752 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CTSAP10619 480 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CCDC130P13994 396 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MYOGP15173 224 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CHRNB2P17787 502 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 DNAJB2P25686 324 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MSNP26038 577 aaKnown RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MAGEA1P43355 309 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 NDUFV1P49821 464 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 ERVK-21P61565 698 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 SMAD3P84022 425 aaKnown RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 SMC1AQ14683 1233 aaKnown RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MTF1Q14872 753 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 NAA35Q5VZE5 725 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 ACAD10Q6JQN1 1059 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 PDE12Q6L8Q7 609 aaKnown RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 FAM171BQ6P995 826 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 PRSS55Q6UWB4 352 aaPredicted RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 TAS1R1Q7RTX1 841 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 FAM35AQ86V20 835 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 OR10T2Q8NGX3 314 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 SLC30A5Q8TAD4 765 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 LNX1Q8TBB1 728 aaPredicted RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 SPPL2BQ8TCT7 592 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CTNNBL1Q8WYA6 563 aaPredicted RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MYLPFQ96A32 169 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 PCED1BQ96HM7 432 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 RTP3Q9BQQ7 232 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 C17orf80Q9BSJ5 609 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 COL25A1Q9BXS0 654 aaPredicted RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 PBX4Q9BYU1 374 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 ABCB6Q9NP58 842 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
PFDN1-204ENST00000512707 CRTAC1Q9NQ79 661 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 KRT82Q9NSB4 513 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 INTUQ9ULD6 942 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 STRIP2Q9ULQ0 834 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 ZKSCAN5Q9Y2L8 839 aa11.49□□□□□ -0.57
PFDN1-204ENST00000512707 PCDHA13Q9Y5I0 950 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms