RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 GARNL3Q5VVW2 1013 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 NAA35Q5VZE5 725 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TMEM132EQ6IEE7 984 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MFSD5Q6N075 450 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 WDR93Q6P2C0 686 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ANGPTL8Q6UXH0 198 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 THSD4Q6ZMP0 1018 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ARHGEF18Q6ZSZ5 1173 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 UNC13DQ70J99 1090 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 LRRC8DQ7L1W4 858 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 RRAGAQ7L523 313 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CCDC186Q7Z3E2 898 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 AKNAQ7Z591 1439 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ADCK1Q86TW2 530 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 FAM35AQ86V20 835 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ZFPM1Q8IX07 1006 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.57□□□□□ -1.84
PVT1-202ENST00000512617 AOPEPQ8N6M6 819 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 USP38Q8NB14 1042 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SCAMP5Q8TAC9 235 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CEP76Q8TAP6 659 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SPATA20Q8TB22 786 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 BRIX1Q8TDN6 353 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 WHAMMQ8TF30 809 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SCFD2Q8WU76 684 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PPP1R13LQ8WUF5 828 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 KCNN1Q92952 543 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 FAM162AQ96A26 154 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 RMDN1Q96DB5 314 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 VWCEQ96DN2 955 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SNX27Q96L92 541 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 C16orf92Q96LL3 132 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 WDR24Q96S15 920 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 NTPCRQ9BSD7 190 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 ASPNQ9BXN1 380 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TEX12Q9BXU0 123 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 KRTAP3-3Q9BYR6 98 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 KRTAP3-2Q9BYR7 98 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SIGLEC1Q9BZZ2 1709 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CFAP74Q9C0B2 1584 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 NRSN2Q9GZP1 204 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TWSG1Q9GZX9 223 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 USP44Q9H0E7 712 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MUC13Q9H3R2 512 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SMARCAD1Q9H4L7 1026 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PRDM12Q9H4Q4 367 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 MROH8Q9H579 483 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 OPA3Q9H6K4 179 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CHODLQ9H9P2 273 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PFDN4Q9NQP4 134 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 ARHGEF3Q9NR81 526 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 TBC1D23Q9NUY8 699 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 HCFC1R1Q9NWW0 138 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 DNAJB12Q9NXW2 375 aaKnown RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 AATFQ9NY61 560 aaKnown RBP eCLIP3.57□□□□□ -1.84
PVT1-202ENST00000512617 TAS2R3Q9NYW6 316 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SELENONQ9NZV5 590 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 C5AR2Q9P296 337 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SUCLA2Q9P2R7 463 aaPredicted RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 HECAQ9UBI9 543 aaPredicted RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 ZNF212Q9UDV6 495 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 HSF4Q9ULV5 492 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 PCDHA6Q9UN73 950 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 EXOC7Q9UPT5 735 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 AURKCQ9UQB9 309 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 NAALADL1Q9UQQ1 740 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 DERAQ9Y315 318 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 CAB39Q9Y376 341 aaPredicted RBP3.57□□□□□ -1.84
PVT1-202ENST00000512617 PCDHGC5Q9Y5F6 944 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 B3GALT1Q9Y5Z6 326 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 POMT1Q9Y6A1 747 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 SQORQ9Y6N5 450 aa3.57□□□□□ -1.84
PVT1-202ENST00000512617 KDM5CP41229 1560 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 DENND4BO75064 1496 aaPredicted RBP3.56□□□□□ -1.84
PVT1-202ENST00000512617 LMTK3Q96Q04 1460 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 TROQ12816 1431 aaPredicted RBP3.56□□□□□ -1.84
PVT1-202ENST00000512617 POGZQ7Z3K3 1410 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 CASKIN1Q8WXD9 1431 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 ARPC4-TTLL3A0A0A6YYG9 625 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 RNF103-CHMP3A0A140T963 221 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 LINC00854A0A1B0GVQ3 168 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 A0A1W2PQ09 198 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 TRIM43BA6NCK2 446 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 RNF103O00237 685 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 CEP104O60308 925 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 PHF2O75151 1096 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 SIN3BO75182 1162 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 UPP2O95045 317 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 APOL3O95236 402 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 FTCDO95954 541 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 F9P00740 461 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 PDHBP11177 359 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 UBL4AP11441 157 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 GSPT1P15170 499 aaKnown RBP3.56□□□□□ -1.84
PVT1-202ENST00000512617 IFNGR1P15260 489 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 TMEM11P17152 192 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 ARF4P18085 180 aaPredicted RBP3.56□□□□□ -1.84
PVT1-202ENST00000512617 SAT1P21673 171 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 KCNA5P22460 613 aa3.56□□□□□ -1.84
PVT1-202ENST00000512617 NFKBIAP25963 317 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms