RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CELF3Q5SZQ8 465 aaKnown RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 ZNF618Q5T7W0 954 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 GJD3Q8N144 294 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 RASGEF1CQ8N431 466 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 LMO3Q8TAP4 145 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 LNX1Q8TBB1 728 aaPredicted RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 HES6Q96HZ4 224 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 FAXDC2Q96IV6 333 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 PSMB7Q99436 277 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 KRT12Q99456 494 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 CGRRF1Q99675 332 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 LRRC1Q9BTT6 524 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 PDE11AQ9HCR9 933 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 HOMER3Q9NSC5 361 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
MSH3-203ENST00000512531 PRKAG3Q9UGI9 489 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 FEZ2Q9UHY8 353 aaPredicted RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 SALL4Q9UJQ4 1053 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 FAM50BQ9Y247 325 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 NOC2LQ9Y3T9 749 aaKnown RBP10.09□□□□□ -0.79
MSH3-203ENST00000512531 SCINQ9Y6U3 715 aa10.09□□□□□ -0.79
MSH3-203ENST00000512531 WDR81Q562E7 1941 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 MICAL3Q7RTP6 2002 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ANKRD63C9JTQ0 380 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 PDE2AO00408 941 aaPredicted RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 PODXLO00592 558 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 TOM1L1O75674 476 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 RGS20O76081 388 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 STBD1O95210 358 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 TNNC2P02585 160 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ADRB2P07550 413 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 P4HA1P13674 534 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 CYP11B1P15538 503 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 RDXP35241 583 aaKnown RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 NSFP46459 744 aaKnown RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 DLG4P78352 724 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 CDC42EP1Q00587 391 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 GUCY2DQ02846 1103 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 TRPC3Q13507 836 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 PRPF4BQ13523 1007 aaKnown RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 HLTFQ14527 1009 aaKnown RBP eCLIP10.08□□□□□ -0.8
MSH3-203ENST00000512531 TCTN1Q2MV58 587 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ODF2Q5BJF6 829 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ZNF484Q5JVG2 852 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ACAD10Q6JQN1 1059 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 CEP128Q6ZU80 1094 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 SPRED2Q7Z698 418 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 NT5DC3Q86UY8 548 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 WDR49Q8IV35 697 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 EFCAB13Q8IY85 973 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 HELQQ8TDG4 1101 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ATP8B4Q8TF62 1192 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 AENQ8WTP8 325 aaKnown RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 PPP1R13LQ8WUF5 828 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 TOP1MTQ969P6 601 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 COL26A1Q96A83 441 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ZNF653Q96CK0 615 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 ANKRD36BP1Q96IX9 119 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 VCPIP1Q96JH7 1222 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 SPATA33Q96N06 139 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 C16orf70Q9BSU1 422 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 AVENQ9NQS1 362 aaPredicted RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 XPNPEP1Q9NQW7 623 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 GDF3Q9NR23 364 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 RBM12Q9NTZ6 932 aaKnown RBP10.08□□□□□ -0.8
MSH3-203ENST00000512531 ERAP1Q9NZ08 941 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 VPS18Q9P253 973 aa10.08□□□□□ -0.8
MSH3-203ENST00000512531 COL1A2P08123 1366 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 TMEM150BA6NC51 233 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 H3BNC9 293 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 CYP26A1O43174 497 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 THAP12O43422 761 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 BUB1BO60566 1050 aaPredicted RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 IL18RAPO95256 599 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 IVLP07476 585 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 GNAT1P11488 350 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 GLRA2P23416 452 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 ADSSP30520 456 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 CHRNA3P32297 505 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 PHKA2P46019 1235 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 PTPN5P54829 565 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 DUOXA2Q1HG44 320 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 HSDL1Q3SXM5 330 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 ZACNQ401N2 412 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 SPDYCQ5MJ68 293 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 RUFY4Q6ZNE9 571 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 FAM43BQ6ZT52 329 aaPredicted RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 ARHGEF19Q8IW93 802 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 MREGQ8N565 214 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 METTL13Q8N6R0 699 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 DBF4BQ8NFT6 615 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 FAM76AQ8TAV0 307 aa10.07□□□□□ -0.8
MSH3-203ENST00000512531 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 SCG3Q8WXD2 468 aaKnown RBP10.07□□□□□ -0.8
MSH3-203ENST00000512531 IFT81Q8WYA0 676 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms