RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 IER5LQ5T953 404 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 LRRC38Q5VT99 294 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 ERICH1Q86X53 443 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 KLHL7Q8IXQ5 586 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 C12orf50Q8NA57 414 aaPredicted RBP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 C3orf20Q8ND61 904 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 WHAMMQ8TF30 809 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 SEC14L1Q92503 715 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 KRT35Q92764 455 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 CELF4Q9BZC1 486 aaKnown RBP13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 SDCBP2Q9H190 292 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 GTF2IRD1Q9UHL9 959 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 REV3LO60673 3130 aa13.88□□□□□ -0.19
DEPDC1B-206ENST00000512452 KMT2BQ9UMN6 2715 aaPredicted RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 CITO14578 2027 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM191CA6NGB0 347 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 RFXAPO00287 272 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 GLI1P08151 1106 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 CFHP08603 1231 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM163BP0C2L3 166 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 C6orf222P0C671 652 aaPredicted RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 CD19P15391 556 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 FGFR4P22455 802 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 DRG2P55039 364 aaKnown RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 RNASE9P60153 205 aaKnown RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 MRPS6P82932 125 aaKnown RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 SLC7A5Q01650 507 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 GUCY2DQ02846 1103 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 TMEM62Q0P6H9 643 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 CNGA2Q16280 664 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 PTPROQ16827 1216 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 GNASQ5JWF2 1037 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 PPP1R15BQ5SWA1 713 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 UNC93AQ86WB7 457 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 SLC13A5Q86YT5 568 aaPredicted RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 PASD1Q8IV76 773 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 MREGQ8N565 214 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 NIPA2Q8N8Q9 360 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 FNIP1Q8TF40 1166 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 PKNOX2Q96KN3 472 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZNF560Q96MR9 790 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 AP1M1Q9BXS5 423 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM129AQ9BZQ8 928 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 RAB17Q9H0T7 212 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 SMYD3Q9H7B4 428 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 EPB41L5Q9HCM4 733 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 MED4Q9NPJ6 270 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 FAM114A2Q9NRY5 505 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 SNTG2Q9NY99 539 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 PCYOX1Q9UHG3 505 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 RASAL2Q9UJF2 1139 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 TRPV2Q9Y5S1 764 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZFHX2Q9C0A1 2572 aaPredicted RBP13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
DEPDC1B-206ENST00000512452 EPG5Q9HCE0 2579 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 FSCN2O14926 492 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 RECQL4O94761 1208 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 CETN2P41208 172 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 TNNT3P45378 269 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 FNTAP49354 379 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZNF268Q14587 947 aaPredicted RBP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 SMC1AQ14683 1233 aaKnown RBP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 UBXN11Q5T124 520 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 PPP2R2DQ66LE6 453 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 KATNAL2Q8IYT4 538 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 WDTC1Q8N5D0 677 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 NT5C1AQ9BXI3 368 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 EIF2AQ9BY44 585 aaKnown RBP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 ELOVL4Q9GZR5 314 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 CHST12Q9NRB3 414 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 HOMER3Q9NSC5 361 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 PIN4Q9Y237 131 aaKnown RBP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 GINS2Q9Y248 185 aa13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 UTP11Q9Y3A2 253 aaKnown RBP13.86□□□□□ -0.19
DEPDC1B-206ENST00000512452 C5orf42Q9H799 3197 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 SIGLEC16A6NMB1 481 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 O00370 1275 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 PODXLO00592 558 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 ADAMTS4O75173 837 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 ZMYND10O75800 440 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 SETSIPP0DME0 302 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 MYBL2P10244 700 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 PYGMP11217 842 aa13.85□□□□□ -0.19
DEPDC1B-206ENST00000512452 ITGA4P13612 1032 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms