RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ETS1P14921 441 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 MARK3P27448 753 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 PCK1P35558 622 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-210ENST00000512332 WDR4P57081 412 aaKnown RBP9.71□□□□□ -0.86
CPNE4-210ENST00000512332 PSMC1P62191 440 aaKnown RBP9.71□□□□□ -0.86
CPNE4-210ENST00000512332 MYO1EQ12965 1108 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 BNIP1Q12981 228 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 PRKG1Q13976 671 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 EFHC2Q5JST6 749 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 EEF1DP3Q658K8 133 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 EEPD1Q7L9B9 569 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 XYLT1Q86Y38 959 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 KIAA0319LQ8IZA0 1049 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 SLC4A11Q8NBS3 891 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 ACTL9Q8TC94 416 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 SGIP1Q9BQI5 828 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 TMEM121Q9BTD3 319 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 INO80BQ9C086 356 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-210ENST00000512332 RXFP1Q9HBX9 757 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 ABCF3Q9NUQ8 709 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.86
CPNE4-210ENST00000512332 PPP1R1BQ9UD71 204 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-210ENST00000512332 CYTH4Q9UIA0 394 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 AGTPBP1Q9UPW5 1226 aa9.71□□□□□ -0.86
CPNE4-210ENST00000512332 ANK1P16157 1881 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 APOC4-APOC2K7ER74 178 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CST8O60676 142 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CILPO75339 1184 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ENDOD1O94919 500 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 STAU1O95793 577 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 APOC2P02655 101 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CD19P15391 556 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 IL1R2P27930 398 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 PHBP35232 272 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 SKIV2L2P42285 1042 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 IREB2P48200 963 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ARL4CP56559 192 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ELF3P78545 371 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 OTUD4Q01804 1114 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 PTPN11Q06124 597 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 TMED2Q15363 201 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 HIF1AQ16665 826 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ZNF484Q5JVG2 852 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 EFCAB12Q6NXP0 572 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 SCARA5Q6ZMJ2 495 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 GADL1Q6ZQY3 521 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ERO1BQ86YB8 467 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ZBED8Q8IZ13 594 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 NAT8LQ8N9F0 302 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 C1orf127Q8N9H9 656 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CCDC63Q8NA47 563 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 JOSD2Q8TAC2 188 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 GDAP1Q8TB36 358 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CPXM1Q96SM3 734 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 MIS12Q9H081 205 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 TRABDQ9H4I3 376 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 KLHL14Q9P2G3 628 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 PSMC3IPQ9P2W1 217 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 KIAA1257Q9ULG3 409 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 POLIQ9UNA4 740 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 KCNH4Q9UQ05 1017 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 POLR2AP24928 1970 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 FOXO6A8MYZ6 492 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 B4GALT5O43286 388 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ATP2C2O75185 946 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 RNF8O76064 485 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 UBOX5O94941 541 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CXCL8P10145 99 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 VDRP11473 427 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 P4HA1P13674 534 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 STIP1P31948 543 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 FOXN2P32314 431 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 GPD2P43304 727 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 PHKA2P46019 1235 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 GEMIN4P57678 1058 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 PDIA2Q13087 525 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 SPARCL1Q14515 664 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 KCTD2Q14681 263 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 FASTKD3Q14CZ7 662 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CEP120Q8N960 986 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ATP11CQ8NB49 1132 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 CPT1BQ92523 772 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 TMEM176AQ96HP8 235 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 NLRP4Q96MN2 994 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 SMC6Q96SB8 1091 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 TACO1Q9BSH4 297 aaKnown RBP9.7□□□□□ -0.86
CPNE4-210ENST00000512332 DHRS4Q9BTZ2 278 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 PITPNM3Q9BZ71 974 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 MROH8Q9H579 483 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 MINDY3Q9H8M7 445 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 VPS37BQ9H9H4 285 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 RSAD1Q9HA92 442 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 IFT122Q9HBG6 1241 aa9.7□□□□□ -0.86
CPNE4-210ENST00000512332 ERAP1Q9NZ08 941 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms