RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 LENG9Q96B70 501 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PDGFCQ9NRA1 345 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 SH3BP5O60239 455 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PAEPP09466 180 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PYGMP11217 842 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 EPHB2P29323 1055 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 BEX3Q00994 111 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 AGBL2Q5U5Z8 902 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 HIBCHQ6NVY1 386 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 KIAA0319LQ8IZA0 1049 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 TGS1Q96RS0 853 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 ACO2Q99798 780 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 CDT1Q9H211 546 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 CHMP2BQ9UQN3 213 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 ZNF862O60290 1169 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PEX10O60683 326 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 SETSIPP0DME0 302 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 COPS2P61201 443 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 ZNF268Q14587 947 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 SMAD1Q15797 465 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 HDAC7Q8WUI4 952 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 TACO1Q9BSH4 297 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PRDM5Q9NQX1 630 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 TXLNGQ9NUQ3 528 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 ABI2Q9NYB9 513 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PCDHA3Q9Y5H8 950 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 PPIL6Q8IXY8 311 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 RAPGEF5Q92565 580 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 DUOX1Q9NRD9 1551 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 RARGP13631 454 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 LHX1P48742 406 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 PRAMEP78395 509 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 OTUD4Q01804 1114 aaKnown RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 PDK2Q15119 407 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 GPATCH11Q8N954 259 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ACTL9Q8TC94 416 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 WNK4Q96J92 1243 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 SEPT5Q99719 369 aaPredicted RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 TUBB6Q9BUF5 446 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 SLC8A2Q9UPR5 921 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 REXO2Q9Y3B8 237 aaKnown RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 RECQL4O94761 1208 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 MAP3K6O95382 1288 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ZNF235Q14590 738 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 NFIL3Q16649 462 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 FAM117BQ6P1L5 589 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ELMSAN1Q6PJG2 1045 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 PPCSQ9HAB8 311 aa13.69□□□□□ -0.22
PCDHA4-202ENST00000512229 GOLGA8RI6L899 631 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 DCTN3O75935 186 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 BST2Q10589 180 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 MMEL1Q495T6 779 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 C4orf22Q6V702 233 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 MYLK4Q86YV6 388 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 A0A0B4J269 797 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 PDE2AO00408 941 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 F9P00740 461 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 GJB1P08034 283 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 HMBSP08397 361 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 GHRP10912 638 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 ESRRAP11474 423 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 EEF1DP3Q658K8 133 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 ZNF449Q6P9G9 518 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 TADA2BQ86TJ2 420 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 GPR20Q99678 358 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 TRIM56Q9BRZ2 755 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 FRMD8Q9BZ67 464 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 FRMD8P1Q9BZ68 369 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 STARD7Q9NQZ5 370 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 PCDHB7Q9Y5E2 793 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms