RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 WEE2P0C1S8 567 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 CCND1P24385 295 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 RARRES1P49788 294 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 GRSF1Q12849 480 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 KRR1Q13601 381 aaKnown RBP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC14Q15048 493 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 KIAA1755Q5JYT7 1200 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 KRT77Q7Z794 578 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 UBE2Q1Q7Z7E8 422 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 SLC20A1Q8WUM9 679 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 VIPAS39Q9H9C1 493 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 F8VZ95 297 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 S100A6P06703 90 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 DGKZQ13574 1117 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 FAM45BPQ6NSW5 357 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 STX12Q86Y82 276 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 HSD3B7Q9H2F3 369 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 DAPK2Q9UIK4 370 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 L1RE1Q9UN81 338 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 CCDC195A0A1B0GUA6 201 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 PGM5Q15124 567 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 MEA1Q16626 185 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 KHDRBS2Q5VWX1 349 aaKnown RBP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 CCDC81Q6ZN84 652 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 TCAIMQ8N3R3 496 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 DEPDC1BQ8WUY9 529 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 SLC5A5Q92911 643 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 C19orf60Q96EN9 201 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 EPAS1Q99814 870 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 PGK2P07205 417 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PAX7P23759 505 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TCF7P36402 384 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 GPS1Q13098 491 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 CENPUQ71F23 418 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PDIK1LQ8N165 341 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 STKLD1Q8NE28 680 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ATP8B4Q8TF62 1192 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 GTSE1Q9NYZ3 720 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 LCA5LO95447 670 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ZBED1O96006 694 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ARL4AP40617 200 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TNFAIP2Q03169 654 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 DHX34Q14147 1143 aaKnown RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TRIM72Q6ZMU5 477 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 CLEC4FQ8N1N0 589 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TAS1R2Q8TE23 839 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TRPC7Q9HCX4 862 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PCDHB2Q9Y5E7 798 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 AKAP10O43572 662 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PDE9AO76083 593 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 KDSRQ06136 332 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 XRRA1Q6P2D8 792 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 TBKBP1A7MCY6 615 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 STK25O00506 426 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 EXTL3O43909 919 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ZCCHC18P0CG32 403 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 CYP2C19P33261 490 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 GJA8P48165 433 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 SNX19Q92543 992 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 SPRTNQ9H040 489 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 KCND1Q9NSA2 647 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-209ENST00000512055 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
CPNE4-209ENST00000512055 ABCC6O95255 1503 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 SCN11AQ9UI33 1791 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 P4HA2O15460 535 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 TRIM13O60858 407 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ITGAXP20702 1163 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 FKBP1AP62942 108 aaKnown RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 RRM2BQ7LG56 351 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 OR8H2Q8N162 312 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
CPNE4-209ENST00000512055 TRIM33Q9UPN9 1127 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ARL2BPQ9Y2Y0 163 aa11.28□□□□□ -0.6
CPNE4-209ENST00000512055 ADAMTSL3P82987 1691 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms