RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 MYRFLQ96LU7 910 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 TSG101Q99816 390 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 SLC46A2Q9BY10 475 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 FBXL21Q9UKT6 434 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 TSC2P49815 1807 aa17.23■□□□□ 0.35
PDLIM5-216ENST00000511767 TRIM49BA6NDI0 452 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 A8MXQ7 604 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 CSH1P0DML2 217 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 CSH2P0DML3 217 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 BDNFP23560 247 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 WEE1P30291 646 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 VCPP55072 806 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 NLRP12P59046 1061 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 VSTM1Q6UX27 236 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 CRYBG2Q8N1P7 616 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 ZSCAN18Q8TBC5 510 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 MYLPFQ96A32 169 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 RSPRY1Q96DX4 576 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 LRRC3BQ96PB8 259 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 DUSP9Q99956 384 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 SMYD3Q9H7B4 428 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 APOBEC3GQ9HC16 384 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
PDLIM5-216ENST00000511767 SLC38A8A6NNN8 435 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 BIN1O00499 593 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 PI15O43692 258 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 NOL4O94818 638 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 PPP1R2P41236 205 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 RAP1GAPP47736 663 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 STIM1Q13586 685 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 CAMK4Q16566 473 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 MDH1BQ5I0G3 518 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 GPR158Q5T848 1215 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 KRT39Q6A163 491 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 PAQR9Q6ZVX9 377 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 SCN4BQ8IWT1 228 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 SIX5Q8N196 739 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 SEMA4DQ92854 862 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 SPATA17Q96L03 361 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.35
PDLIM5-216ENST00000511767 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 PSMA7O14818 248 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 P4HA1P13674 534 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 PSMC3P17980 439 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 CDC25CP30307 473 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 GRIK1P39086 918 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 STARD6P59095 220 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 CYP27A1Q02318 531 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 FOXR2Q6PJQ5 311 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 VITQ6UXI7 678 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 STKLD1Q8NE28 680 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 CEP295NLQ96MC4 621 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 KCNH6Q9H252 994 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■■■ 86.5
PDLIM5-216ENST00000511767 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 HCN4Q9Y3Q4 1203 aa17.2■□□□□ 0.34
PDLIM5-216ENST00000511767 F5P12259 2224 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 HEPACAM2A8MVW5 462 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 CLDN5O00501 218 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 ASPAP45381 313 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 ARHGAP15Q53QZ3 475 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 MON1AQ86VX9 555 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 UNC93AQ86WB7 457 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 TMEM105Q8N8V8 129 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 FLCNQ8NFG4 579 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 TRMT2BQ96GJ1 504 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 TRMT61BQ9BVS5 477 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 MFSD1Q9H3U5 465 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 MMRN2Q9H8L6 949 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 CYP3A43Q9HB55 503 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 TMEM30AQ9NV96 361 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 RAB20Q9NX57 234 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 ARMCX3Q9UH62 379 aaPredicted RBP17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 COQ4Q9Y3A0 265 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 MUC6Q6W4X9 2439 aa17.19■□□□□ 0.34
PDLIM5-216ENST00000511767 STX10O60499 249 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms