RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ARPC5LQ9BPX5 153 aa4.11□□□□□ -1.75
TRAPPC11-207ENST00000511409 TESQ9UGI8 421 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-207ENST00000511409 A0A0B4J269 797 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 LOC102723971A0A1B0GUV8 181 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 ABHD14A-ACY1A0A1B0GW23 586 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 A0A1W2PS29 197 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 H7C4K7 107 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 hCG_1984214I3L0E3 225 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 OVOL3O00110 214 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 RGS10O43665 173 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 TRIAP1O43715 76 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 FGF18O76093 207 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 INMTO95050 263 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 RASAL1O95294 804 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 IL1R1P14778 569 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 TPH1P17752 444 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 NR4A1P22736 598 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 IL1R2P27930 398 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 CD6P30203 668 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 LRPAP1P30533 357 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 TOB1P50616 345 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 HTRA4P83105 476 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 DGCR2P98153 550 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 GUCY1B3Q02153 619 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 TUBB3Q13509 450 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 INSCQ1MX18 579 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 ARHGAP40Q5TG30 622 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 ARMC6Q6NXE6 501 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 FBXO38Q6PIJ6 1188 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 CRIP3Q6Q6R5 217 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 GAS2L3Q86XJ1 694 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 FAM9AQ8IZU1 332 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 RNF152Q8N8N0 203 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 ENAHQ8N8S7 591 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 Q8NA96 180 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 CCDC150Q8NCX0 1101 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 BRI3BPQ8WY22 251 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 NACC2Q96BF6 587 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 BOD1Q96IK1 185 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZNF703Q9H7S9 590 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 NRDE2Q9H7Z3 1164 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 SLC2A4RGQ9NR83 387 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 INTS13Q9NVM9 706 aa4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 MAGED2Q9UNF1 606 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 MRPS17Q9Y2R5 130 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-207ENST00000511409 A0A1W2PPC4 97 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 LPXNO60711 386 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 SPDEFO95238 335 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MYL4P12829 197 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 GATA3P23771 443 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 ACVR2AP27037 513 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 PTGS2P35354 604 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 PPM1AP35813 382 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 TECP42680 631 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 PTDSS1P48651 473 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 CPT1AP50416 773 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 VAV2P52735 878 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 ARHGEF7Q14155 803 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 E2F2Q14209 437 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 HLXQ14774 488 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 STARD3Q14849 445 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 GORABQ5T7V8 394 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 RGS7BPQ6MZT1 257 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 KCNV1Q6PIU1 500 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 SPRED1Q7Z699 444 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 SYTL1Q8IYJ3 562 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 SLC16A11Q8NCK7 471 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 BPIFB1Q8TDL5 484 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 POF1BQ8WVV4 589 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 HAS1Q92839 578 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 PPP2R3CQ969Q6 453 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 PTCD3Q96EY7 689 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MYEOVQ96EZ4 313 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 ZC3H10Q96K80 434 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MESP1Q9BRJ9 268 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 CRB3Q9BUF7 120 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 PTDSS2Q9BVG9 487 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 SELENOOQ9BVL4 669 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 COLEC11Q9BWP8 271 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MAGEB5Q9BZ81 275 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 TPSD1Q9BZJ3 242 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 UNKLQ9H9P5 680 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 TBCCD1Q9NVR7 557 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 ANKFY1Q9P2R3 1169 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MYO1AQ9UBC5 1043 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 SERTAD3Q9UJW9 196 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MAN2B2Q9Y2E5 1009 aa4.09□□□□□ -1.75
TRAPPC11-207ENST00000511409 MARCH11A6NNE9 402 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 PPFIA4O75335 1185 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 ITGAMP11215 1152 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 BTF3P20290 206 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 EEF1GP26641 437 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 BMPR1AP36894 532 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 HSPA7P48741 367 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 TNFAIP2Q03169 654 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 MYO1EQ12965 1108 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 TP53BP2Q13625 1128 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms