RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	FOXQ1	Q9C009	403 aa		13	□□□□□ -0.33
CLDND1-223	ENST00000511081	ATXN3L	Q9H3M9	355 aa		13	□□□□□ -0.33
CLDND1-223	ENST00000511081	BRD9	Q9H8M2	597 aa		13	□□□□□ -0.33
CLDND1-223	ENST00000511081	LTB4R2	Q9NPC1	389 aa		13	□□□□□ -0.33
CLDND1-223	ENST00000511081	CDH9	Q9ULB4	789 aa		13	□□□□□ -0.33
CLDND1-223	ENST00000511081	MTF2	Q9Y483	593 aa	Predicted RBP	13	□□□□□ -0.33
CLDND1-223	ENST00000511081	NME7	Q9Y5B8	376 aa		13	□□□□□ -0.33
CLDND1-223	ENST00000511081	COL4A2	P08572	1712 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	PTPRZ1	P23471	2315 aa	Predicted RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	FAM170B	A6NMN3	283 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	IKBKB	O14920	756 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	MAPK13	O15264	365 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CHAD	O15335	359 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	HCRT	O43612	131 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	ATP2C2	O75185	946 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	NOL4	O94818	638 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	DCN	P07585	359 aa	Known RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CSH1	P0DML2	217 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CSH2	P0DML3	217 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	GDI1	P31150	447 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	GNL1	P36915	607 aa	Predicted RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	MAGEA9	P43362	315 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CASP4	P49662	377 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CDR1	P51861	262 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	NLRP12	P59046	1061 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	RPL10A	P62906	217 aa	Known RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	NUCB2	P80303	420 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	ENPEP	Q07075	957 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	GRM2	Q14416	872 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	ANGPT1	Q15389	498 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	MAPRE1	Q15691	268 aa	Known RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CCDC142	Q17RM4	750 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	ARHGAP15	Q53QZ3	475 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	GPR158	Q5T848	1215 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	FMR1NB	Q8N0W7	255 aa	Predicted RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	GUF1	Q8N442	669 aa	Known RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	ENGASE	Q8NFI3	743 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	FAM200A	Q8TCP9	573 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	CRTAC1	Q9NQ79	661 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	HEBP1	Q9NRV9	189 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	FAM86C1	Q9NVL1	165 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	MIA3	Q5JRA6	1907 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	COL4A3	Q01955	1670 aa		12.99	□□□□□ -0.33
CLDND1-223	ENST00000511081	GREB1	Q4ZG55	1949 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	TULP1	O00294	542 aa	Predicted RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	MAN2B1	O00754	1011 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	ZNF263	O14978	683 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	LRRN2	O75325	713 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	KIF20A	O95235	890 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	NR3C1	P04150	777 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	CD72	P21854	359 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	DDX6	P26196	483 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	RPS9	P46781	194 aa	Known RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	GPR15	P49685	360 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	MYL6	P60660	151 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	DDR2	Q16832	855 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	WDR72	Q3MJ13	1102 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	C1orf220	Q5T0J3	134 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	TDRD10	Q5VZ19	366 aa	Known RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	VSTM1	Q6UX27	236 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	ZNF852	Q6ZMS4	543 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	C4orf50	Q6ZRC1	276 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	MON1A	Q86VX9	555 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	C1orf210	Q8IVY1	113 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	MAML2	Q8IZL2	1156 aa	Predicted RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	MYCBPAP	Q8TBZ2	947 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	SYAP1	Q96A49	352 aa	Predicted RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	SPATA17	Q96L03	361 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	SYT15	Q9BQS2	421 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	MRPL45	Q9BRJ2	306 aa	Known RBP	12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	SLITRK6	Q9H5Y7	841 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	GDPD2	Q9HCC8	539 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	FAM186A	A6NE01	2351 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	PTPRD	P23468	1912 aa		12.98	□□□□□ -0.33
CLDND1-223	ENST00000511081	SLC38A8	A6NNN8	435 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	VNN1	O95497	513 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	PRAMEF12	O95522	483 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	PDGFRB	P09619	1106 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	RFX1	P22670	979 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	TARS	P26639	723 aa	Known RBP	12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	DLG4	P78352	724 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	CYP4F8	P98187	520 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	TAF12	Q16514	161 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	ZACN	Q401N2	412 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	ZCWPW2	Q504Y3	356 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	ARHGAP29	Q52LW3	1261 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	TPRG1	Q6ZUI0	275 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	CMTM8	Q8IZV2	173 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	SPATA20	Q8TB22	786 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	CCDC47	Q96A33	483 aa	Known RBP	12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	MMS19	Q96T76	1030 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	UXT	Q9UBK9	157 aa	Predicted RBP	12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	MRPS17	Q9Y2R5	130 aa	Known RBP	12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	OBSL1	O75147	1896 aa		12.97	□□□□□ -0.33
CLDND1-223	ENST00000511081	FANCM	Q8IYD8	2048 aa		12.96	□□□□□ -0.33
CLDND1-223	ENST00000511081	TICRR	Q7Z2Z1	1910 aa		12.96	□□□□□ -0.33

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