RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
CHFR-208ENST00000511001 RPN1P04843 607 aaKnown RBP12.9□□□□□ -0.34
CHFR-208ENST00000511001 MYL1P05976 194 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 CSH1P0DML2 217 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 CSH2P0DML3 217 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 NLRP12P59046 1061 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
CHFR-208ENST00000511001 CLDN10P78369 228 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 FCHO2Q0JRZ9 810 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 DPYDQ12882 1025 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 DDR2Q16832 855 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 ARHGAP15Q53QZ3 475 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 GOLGA5Q8TBA6 731 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 CLDN23Q96B33 292 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
CHFR-208ENST00000511001 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 OBP2AQ9NY56 170 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 CDH9Q9ULB4 789 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
CHFR-208ENST00000511001 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 CACNA1AO00555 2505 aa12.9□□□□□ -0.34
CHFR-208ENST00000511001 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
CHFR-208ENST00000511001 PDXKO00764 312 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 ZNF263O14978 683 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 CHADO15335 359 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 TACC1O75410 805 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 RHOBTB3O94955 611 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
CHFR-208ENST00000511001 PDGFRBP09619 1106 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 FAM163BP0C2L3 166 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 MAGEA11P43364 429 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 MYL6P60660 151 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 RPL10AP62906 217 aaKnown RBP12.89□□□□□ -0.35
CHFR-208ENST00000511001 TAF12Q16514 161 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 TDRD10Q5VZ19 366 aaKnown RBP12.89□□□□□ -0.35
CHFR-208ENST00000511001 ZNF852Q6ZMS4 543 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
CHFR-208ENST00000511001 MYLPFQ96A32 169 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 MYRFLQ96LU7 910 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 NELL2Q99435 816 aa12.89□□□□□ -0.35
CHFR-208ENST00000511001 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
CHFR-208ENST00000511001 ZNF202O95125 648 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 VNN1O95497 513 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 NR3C1P04150 777 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 SP9P0CG40 484 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 MAGEA9P43362 315 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 DLG4P78352 724 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 WDR44Q5JSH3 913 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 CMTM8Q8IZV2 173 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
CHFR-208ENST00000511001 ZFYVE19Q96K21 471 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 GCNAQ96QF7 691 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
CHFR-208ENST00000511001 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 NDRG2Q9UN36 371 aaKnown RBP12.88□□□□□ -0.35
CHFR-208ENST00000511001 TRAF3IP3Q9Y228 551 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 MYO16Q9Y6X6 1858 aa12.88□□□□□ -0.35
CHFR-208ENST00000511001 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 MAN2B1O00754 1011 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 DPYSL4O14531 572 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 BDNFP23560 247 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHFR-208ENST00000511001 ATICP31939 592 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
CHFR-208ENST00000511001 RPS9P46781 194 aaKnown RBP12.87□□□□□ -0.35
CHFR-208ENST00000511001 SOX9P48436 509 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 MLLT6P55198 1093 aaPredicted RBP12.87□□□□□ -0.35
CHFR-208ENST00000511001 TRPC3Q13507 836 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 KCNB1Q14721 858 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 NFIL3Q16649 462 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 ARHGAP29Q52LW3 1261 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 TXNDC8Q6A555 127 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 SCN4BQ8IWT1 228 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 YAF2Q8IY57 180 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 BPIFB1Q8TDL5 484 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 FAM3CQ92520 227 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
CHFR-208ENST00000511001 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 SDCBP2Q9H190 292 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 SMYD3Q9H7B4 428 aa12.87□□□□□ -0.35
CHFR-208ENST00000511001 TMEM30AQ9NV96 361 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms