RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FAPQ12884 760 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 TAF7LQ5H9L4 462 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 PEG10Q86TG7 708 aaKnown RBP8.55□□□□□ -1.04
USP53-206ENST00000510737 PPM1NQ8N819 430 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 LPIN2Q92539 896 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 TMEM125Q96AQ2 219 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 UROC1Q96N76 676 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 CTTNBP2NLQ9P2B4 639 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 INTUQ9ULD6 942 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
USP53-206ENST00000510737 LY75O60449 1722 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 TNRC6CQ9HCJ0 1690 aaKnown RBP8.54□□□□□ -1.04
USP53-206ENST00000510737 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 SRGNP10124 158 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 FLYWCH1Q4VC44 716 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 GIMAP6Q6P9H5 292 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 RHOT1Q8IXI2 618 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 SLC30A5Q8TAD4 765 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 TFAP2BQ92481 460 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 C7orf25Q9BPX7 421 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 RNF7Q9UBF6 113 aa8.54□□□□□ -1.04
USP53-206ENST00000510737 USP54Q70EL1 1684 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 PROM1O43490 865 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 HAUS5O94927 633 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 AGFG2O95081 481 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 KCNA3P22001 575 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 ABCG1P45844 678 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
USP53-206ENST00000510737 LBX1P52954 281 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 CT47A1Q5JQC4 288 aaPredicted RBP8.53□□□□□ -1.04
USP53-206ENST00000510737 AKNAD1Q5T1N1 836 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 SPATS2Q86XZ4 545 aaKnown RBP8.53□□□□□ -1.04
USP53-206ENST00000510737 WDR66Q8TBY9 1149 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 LRIG1Q96JA1 1093 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 TIMP4Q99727 224 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
USP53-206ENST00000510737 PRAMEF33A0A0G2JMD5 474 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 K7ESF4 209 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 PRAMEF10O60809 474 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 DPEP1P16444 411 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 HSD3B2P26439 372 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 WASP42768 502 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 CREMQ03060 361 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 CD300EQ496F6 205 aaPredicted RBP8.52□□□□□ -1.05
USP53-206ENST00000510737 DPF1Q92782 380 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 HEPHQ9BQS7 1158 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 TUBD1Q9UJT1 453 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 CDYLQ9Y232 598 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 ENTPD2Q9Y5L3 495 aa8.52□□□□□ -1.05
USP53-206ENST00000510737 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
USP53-206ENST00000510737 GRM6O15303 877 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 MPPED1O15442 326 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
USP53-206ENST00000510737 KCNA2P16389 499 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 MC2RQ01718 297 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 UTP14CQ5TAP6 766 aaKnown RBP8.51□□□□□ -1.05
USP53-206ENST00000510737 NSUN7Q8NE18 718 aaKnown RBP8.51□□□□□ -1.05
USP53-206ENST00000510737 IFI44Q8TCB0 444 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 KLHL32Q96NJ5 620 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 SLKQ9H2G2 1235 aaPredicted RBP8.51□□□□□ -1.05
USP53-206ENST00000510737 CPNE5Q9HCH3 593 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 PCDHA13Q9Y5I0 950 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 TTC21BQ7Z4L5 1316 aa8.51□□□□□ -1.05
USP53-206ENST00000510737 USP47Q96K76 1375 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 ADM5C9JUS6 153 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 SUN1O94901 812 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
USP53-206ENST00000510737 ITPKBP27987 946 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 SRSF4Q08170 494 aaKnown RBP8.5□□□□□ -1.05
USP53-206ENST00000510737 KAZNQ674X7 775 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 KRT26Q7Z3Y9 468 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 NLGN4YQ8NFZ3 816 aaPredicted RBP8.5□□□□□ -1.05
USP53-206ENST00000510737 SARAFQ96BY9 339 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 INTS13Q9NVM9 706 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 ADAM21Q9UKJ8 722 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 TOGARAM1Q9Y4F4 1720 aa8.5□□□□□ -1.05
USP53-206ENST00000510737 KAT6BQ8WYB5 2073 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 MMP10P09238 476 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 WT1P19544 449 aaPredicted RBP8.49□□□□□ -1.05
USP53-206ENST00000510737 GRIA3P42263 894 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 KLF1Q13351 362 aaPredicted RBP8.49□□□□□ -1.05
USP53-206ENST00000510737 SDE2Q6IQ49 451 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 C1QL2Q7Z5L3 287 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 MYCBPAPQ8TBZ2 947 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 FBXL20Q96IG2 436 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 TMX3Q96JJ7 454 aa8.49□□□□□ -1.05
USP53-206ENST00000510737 VWC2LB2RUY7 222 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 ERBB2P04626 1255 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 HSPA8P11142 646 aaKnown RBP8.48□□□□□ -1.05
USP53-206ENST00000510737 ZNF280AP59817 542 aaPredicted RBP8.48□□□□□ -1.05
USP53-206ENST00000510737 TMPRSS9Q7Z410 1059 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 CLNKQ7Z7G1 428 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 TMIEQ8NEW7 156 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 DDB2Q92466 427 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 ZNF778Q96MU6 729 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 DOT1LQ8TEK3 1739 aa8.48□□□□□ -1.05
USP53-206ENST00000510737 C5P01031 1676 aa8.47□□□□□ -1.05
USP53-206ENST00000510737 GLTPD2A6NH11 291 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms