RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 SYT15Q9BQS2 421 aa22.72■■□□□ 1.23
LIN54-208ENST00000509748 MRPL45Q9BRJ2 306 aaKnown RBP22.72■■□□□ 1.23
LIN54-208ENST00000509748 BCO2Q9BYV7 579 aa22.72■■□□□ 1.23
LIN54-208ENST00000509748 CDH9Q9ULB4 789 aa22.72■■□□□ 1.23
LIN54-208ENST00000509748 PATJQ8NI35 1801 aa22.72■■□□□ 1.23
LIN54-208ENST00000509748 PTPRDP23468 1912 aa22.72■■□□□ 1.23
LIN54-208ENST00000509748 GREB1Q4ZG55 1949 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 PRR23AA6NEV1 266 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 PDXKO00764 312 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 TACC1O75410 805 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 NOL4O94818 638 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 STAU1O95793 577 aaKnown RBP22.71■■□□□ 1.23
LIN54-208ENST00000509748 PDGFRBP09619 1106 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 FAM163BP0C2L3 166 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 SP9P0CG40 484 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 CSH1P0DML2 217 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 CSH2P0DML3 217 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 MYL6P60660 151 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 PSMC1P62191 440 aaKnown RBP22.71■■□□□ 1.23
LIN54-208ENST00000509748 RPL10AP62906 217 aaKnown RBP22.71■■□□□ 1.23
LIN54-208ENST00000509748 DPYDQ12882 1025 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 KRBA2Q6ZNG9 492 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 FSIP1Q8NA03 581 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 MYRFLQ96LU7 910 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 MMS19Q96T76 1030 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 SMG9Q9H0W8 520 aaKnown RBP22.71■■□□□ 1.23
LIN54-208ENST00000509748 GDPD2Q9HCC8 539 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 CFAP54Q96N23 3096 aa22.71■■□□□ 1.23
LIN54-208ENST00000509748 GVINP1Q7Z2Y8 2422 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 SLC38A8A6NNN8 435 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 LRRIQ3A6PVS8 624 aaPredicted RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 MAN2B1O00754 1011 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 TADA3O75528 432 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 RHOBTB3O94955 611 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 MAGEA11P43364 429 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 RPS9P46781 194 aaKnown RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 MLLT6P55198 1093 aaPredicted RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 WDR72Q3MJ13 1102 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 TDRD10Q5VZ19 366 aaKnown RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 SPATA2LQ8IUW3 424 aaPredicted RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 CMTM8Q8IZV2 173 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 TRMT2BQ96GJ1 504 aaKnown RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 MRPS17Q9Y2R5 130 aaKnown RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 PIAS3Q9Y6X2 628 aa22.7■■□□□ 1.22
LIN54-208ENST00000509748 EP300Q09472 2414 aaPredicted RBP22.7■■□□□ 1.22
LIN54-208ENST00000509748 ZNF638Q14966 1978 aaKnown RBP22.69■■□□□ 1.22
LIN54-208ENST00000509748 KIF26AQ9ULI4 1882 aaPredicted RBP22.69■■□□□ 1.22
LIN54-208ENST00000509748 C4BPAP04003 597 aaKnown RBP22.69■■□□□ 1.22
LIN54-208ENST00000509748 NR3C1P04150 777 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 GNL1P36915 607 aaPredicted RBP22.69■■□□□ 1.22
LIN54-208ENST00000509748 MAGEA9P43362 315 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 TXNDC8Q6A555 127 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 YAF2Q8IY57 180 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 MYLPFQ96A32 169 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 ZFYVE19Q96K21 471 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 GCNAQ96QF7 691 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 VRTNQ9H8Y1 702 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 ZMYM5Q9UJ78 669 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 MAGED2Q9UNF1 606 aaPredicted RBP22.69■■□□□ 1.22
LIN54-208ENST00000509748 ANAPC1Q9H1A4 1944 aa22.69■■□□□ 1.22
LIN54-208ENST00000509748 SOBPA7XYQ1 873 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 DPYSL4O14531 572 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 ZNF202O95125 648 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 VNN1O95497 513 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 ATICP31939 592 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 DLG4P78352 724 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 ARHGAP29Q52LW3 1261 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 C4orf50Q6ZRC1 276 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 MON1AQ86VX9 555 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 MAB21L3Q8N8X9 362 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 MYCBPAPQ8TBZ2 947 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 BPIFB1Q8TDL5 484 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 FAM3CQ92520 227 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 USP13Q92995 863 aaPredicted RBP22.68■■□□□ 1.22
LIN54-208ENST00000509748 NKD2Q969F2 451 aaPredicted RBP22.68■■□□□ 1.22
LIN54-208ENST00000509748 SPATA6Q9NWH7 488 aaPredicted RBP22.68■■□□□ 1.22
LIN54-208ENST00000509748 MAGEC2Q9UBF1 373 aaPredicted RBP22.68■■□□□ 1.22
LIN54-208ENST00000509748 NDRG2Q9UN36 371 aaKnown RBP22.68■■□□□ 1.22
LIN54-208ENST00000509748 TRAF3IP3Q9Y228 551 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 CCL26Q9Y258 94 aa22.68■■□□□ 1.22
LIN54-208ENST00000509748 NCAM2O15394 837 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 BDNFP23560 247 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 DDX6P26196 483 aaKnown RBP eCLIP22.67■■□□□ 1.22
LIN54-208ENST00000509748 SOX9P48436 509 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 AP3M2P53677 418 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 TRPC3Q13507 836 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 WDR44Q5JSH3 913 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 C1orf220Q5T0J3 134 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 VSTM1Q6UX27 236 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 SCN4BQ8IWT1 228 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 CELF5Q8N6W0 485 aaKnown RBP22.67■■□□□ 1.22
LIN54-208ENST00000509748 RIN3Q8TB24 985 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 PCED1BQ96HM7 432 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 SNX25Q9H3E2 840 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 R4GN57 208 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 ZNF292O60281 2723 aa22.67■■□□□ 1.22
LIN54-208ENST00000509748 CCNE1P24864 410 aa22.66■■□□□ 1.22
LIN54-208ENST00000509748 TNNC1P63316 161 aa22.66■■□□□ 1.22
LIN54-208ENST00000509748 MAPRE1Q15691 268 aaKnown RBP22.66■■□□□ 1.22
LIN54-208ENST00000509748 OR6B3Q8NGW1 331 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms