RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SUSD3Q96L08 255 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 LPIN3Q9BQK8 851 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 SYT15Q9BQS2 421 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 MIS12Q9H081 205 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 ST7Q9NRC1 585 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
LYSMD3-204ENST00000509384 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 TBKBP1A7MCY6 615 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 F8W810 466 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 MYO1FO00160 1098 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 KCNK3O14649 394 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 KIAA0355O15063 1070 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 ZNF185O15231 689 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 SPOPO43791 374 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 ERBB2P04626 1255 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 PFKMP08237 780 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 RAG1P15918 1043 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 PTPN1P18031 435 aaKnown RBP13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 COMTP21964 271 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 GATMP50440 423 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 GSCP56915 257 aaPredicted RBP13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 TAP1Q03518 808 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 BST2Q10589 180 aaKnown RBP13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 PKDCCQ504Y2 493 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 ANKRD52Q8NB46 1076 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 FEZF2Q8TBJ5 459 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 SLC2A14Q8TDB8 520 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 COG1Q8WTW3 980 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 HES6Q96HZ4 224 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 SELENOOQ9BVL4 669 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 TRIM7Q9C029 511 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 OGFRQ9NZT2 677 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 TJP2Q9UDY2 1190 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 DNAJB4Q9UDY4 337 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 CDH9Q9ULB4 789 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
LYSMD3-204ENST00000509384 TCRBV5S1A1TA0A578 114 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 MIF4GDA9UHW6 222 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 GOLGA8SH3BPF8 625 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 ATP2C2O75185 946 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 GJB6O95452 261 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 TYMPP19971 482 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 GABRB2P47870 512 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 RGS7P49802 495 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 SLC8A3P57103 927 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 SNX16P57768 344 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 PDE4CQ08493 712 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 MDH1BQ5I0G3 518 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 OVOS1Q6IE37 1185 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 DCUN1D2Q6PH85 259 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 LRRC43Q8N309 656 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 TMEM199Q8N511 208 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 TSC1Q92574 1164 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 MCEEQ96PE7 176 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 HNRNPABQ99729 332 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 NRDE2Q9H7Z3 1164 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 ARGLU1Q9NWB6 273 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 LCMT1Q9UIC8 334 aa13.31□□□□□ -0.28
LYSMD3-204ENST00000509384 ABHD14A-ACY1A0A1B0GW23 586 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 EFCAB8A8MWE9 144 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 E5RJQ4 531 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CES2O00748 559 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 DDX3YO15523 660 aaKnown RBP13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 TADA2AO75478 443 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 PROSCO94903 275 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 UPP2O95045 317 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CSF2RAP15509 400 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 ITGB8P26012 769 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 SLC1A1P43005 524 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 KIAA0319Q5VV43 1072 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 THEM5Q8N1Q8 247 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 UBL4BQ8N7F7 174 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 STK32AQ8WU08 396 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 VWCEQ96DN2 955 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 PBKQ96KB5 322 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 CRTAC1Q9NQ79 661 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 IP6K2Q9UHH9 426 aa13.3□□□□□ -0.28
LYSMD3-204ENST00000509384 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms