RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 VSTM1Q6UX27 236 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 VITQ6UXI7 678 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 OR6B3Q8NGW1 331 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 MYCBPAPQ8TBZ2 947 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 TAF4BQ92750 862 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 IRF7Q92985 503 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 TRMT2BQ96GJ1 504 aaKnown RBP16.79■□□□□ 0.28
COMMD8-202ENST00000509220 MYRFLQ96LU7 910 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 MRPL45Q9BRJ2 306 aaKnown RBP16.79■□□□□ 0.28
COMMD8-202ENST00000509220 MKNK1Q9BUB5 465 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
COMMD8-202ENST00000509220 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 CRTAC1Q9NQ79 661 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 OBP2AQ9NY56 170 aa16.79■□□□□ 0.28
COMMD8-202ENST00000509220 UXTQ9UBK9 157 aaPredicted RBP16.79■□□□□ 0.28
COMMD8-202ENST00000509220 NXF1Q9UBU9 619 aaKnown RBP16.79■□□□□ 0.28
COMMD8-202ENST00000509220 DENND4CQ5VZ89 1909 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
COMMD8-202ENST00000509220 ATP2C2O75185 946 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 AKAP3O75969 853 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 NOL4O94818 638 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 VNN1O95497 513 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 F11P03951 625 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 PDGFRBP09619 1106 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 DDX6P26196 483 aaKnown RBP eCLIP16.78■□□□□ 0.28
COMMD8-202ENST00000509220 VIPR2P41587 438 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 GPR15P49685 360 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 NLRP12P59046 1061 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 PSMC1P62191 440 aaKnown RBP16.78■□□□□ 0.28
COMMD8-202ENST00000509220 DDR2Q16832 855 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 STXBP5Q5T5C0 1151 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 SV2AQ7L0J3 742 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 ARID3BQ8IVW6 561 aaPredicted RBP16.78■□□□□ 0.28
COMMD8-202ENST00000509220 CCDC105Q8IYK2 499 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 MYLPFQ96A32 169 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 BRD9Q9H8M2 597 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 SIT1Q9Y3P8 196 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 PCDHA5Q9Y5H7 936 aa16.78■□□□□ 0.28
COMMD8-202ENST00000509220 KANSL1LA0AUZ9 987 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 KRT13P13646 458 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 P4HA1P13674 534 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 PRCPP42785 496 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 GRM2Q14416 872 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 CCDC142Q17RM4 750 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 C1orf220Q5T0J3 134 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 TMEM150AQ86TG1 271 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.28
COMMD8-202ENST00000509220 PJA1Q8NG27 643 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 PCED1BQ96HM7 432 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 SPATA17Q96L03 361 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 NELL2Q99435 816 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
COMMD8-202ENST00000509220 PTPRDP23468 1912 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 SLC38A8A6NNN8 435 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 A8MXQ7 604 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 DPYSL4O14531 572 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 ZNF263O14978 683 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 CHADO15335 359 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 PTPN1P18031 435 aaKnown RBP16.76■□□□□ 0.27
COMMD8-202ENST00000509220 GDI1P31150 447 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 CYP4F8P98187 520 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 CYP27A1Q02318 531 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 SCN4BQ8IWT1 228 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 YAF2Q8IY57 180 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 DTWD2Q8NBA8 298 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 SLC46A2Q9BY10 475 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 MAGED2Q9UNF1 606 aaPredicted RBP16.76■□□□□ 0.27
COMMD8-202ENST00000509220 NME7Q9Y5B8 376 aa16.76■□□□□ 0.27
COMMD8-202ENST00000509220 CACNA1HO95180 2353 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 TRIM66O15016 1216 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 CETN3O15182 167 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 KINO60870 393 aaKnown RBP16.75■□□□□ 0.27
COMMD8-202ENST00000509220 ASS1P00966 412 aaKnown RBP16.75■□□□□ 0.27
COMMD8-202ENST00000509220 GLULP15104 373 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 BDNFP23560 247 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 GTF2H1P32780 548 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 GRIK1P39086 918 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 MLLT6P55198 1093 aaPredicted RBP16.75■□□□□ 0.27
COMMD8-202ENST00000509220 MDH1BQ5I0G3 518 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 SDHAF4Q5VUM1 108 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 CMTM8Q8IZV2 173 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 B3GALNT2Q8NCR0 500 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 MRPS31Q92665 395 aaKnown RBP16.75■□□□□ 0.27
COMMD8-202ENST00000509220 RSPRY1Q96DX4 576 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 TSG101Q99816 390 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 IMPG2Q9BZV3 1241 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 SMYD3Q9H7B4 428 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 HEBP1Q9NRV9 189 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 EHD2Q9NZN4 543 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 DLGAP2Q9P1A6 1054 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
COMMD8-202ENST00000509220 OBSL1O75147 1896 aa16.75■□□□□ 0.27
COMMD8-202ENST00000509220 GREB1Q4ZG55 1949 aa16.74■□□□□ 0.27
COMMD8-202ENST00000509220 NCANO14594 1321 aa16.74■□□□□ 0.27
COMMD8-202ENST00000509220 ARNTLO00327 626 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms