RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 IRF7Q92985 503 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 CCDC47Q96A33 483 aaKnown RBP15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 ZFYVE19Q96K21 471 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 DDX23Q9BUQ8 820 aaKnown RBP15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 SNX25Q9H3E2 840 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 TRPV4Q9HBA0 871 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 CRTAC1Q9NQ79 661 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 PIEZO1Q92508 2521 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 SLC38A8A6NNN8 435 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 MYL1P05976 194 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 HMGA1P17096 107 aaKnown RBP15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 WARSP23381 471 aaKnown RBP15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 NLRP12P59046 1061 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 RPL10AP62906 217 aaKnown RBP15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 MDH1BQ5I0G3 518 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 TDRD10Q5VZ19 366 aaKnown RBP15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 ZNF852Q6ZMS4 543 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 DPH6Q7L8W6 267 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 MAB21L3Q8N8X9 362 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 CSGALNACT1Q8TDX6 532 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 PARD3BQ8TEW8 1205 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 LRRC3BQ96PB8 259 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 SLC46A2Q9BY10 475 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 BCO2Q9BYV7 579 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 DPEP3Q9H4B8 488 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 TASP1Q9H6P5 420 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 MAGEC2Q9UBF1 373 aaPredicted RBP15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 CDH9Q9ULB4 789 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 NME7Q9Y5B8 376 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 PIAS3Q9Y6X2 628 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 ANAPC1Q9H1A4 1944 aa15.84■□□□□ 0.13
UBE2D3-228ENST00000508974 GOLGA6L4A6NEF3 574 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 PDXKO00764 312 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 GFRA3O60609 400 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 RHOBTB3O94955 611 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 CSH1P0DML2 217 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 CSH2P0DML3 217 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 BDNFP23560 247 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 GNL1P36915 607 aaPredicted RBP15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 RAP1GAPP47736 663 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 SOX9P48436 509 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 ZNF699Q32M78 642 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 TXNDC8Q6A555 127 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 C4orf50Q6ZRC1 276 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 LIMS2Q7Z4I7 341 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 TMEM150AQ86TG1 271 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 SMYD4Q8IYR2 804 aaPredicted RBP15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 SPATA18Q8TC71 538 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 E2F7Q96AV8 911 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 TRPC7Q9HCX4 862 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 ABCB6Q9NP58 842 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.121e-7■■■■■ 61.1
UBE2D3-228ENST00000508974 DMAC2Q9NW81 257 aa15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 SPATA6Q9NWH7 488 aaPredicted RBP15.83■□□□□ 0.12
UBE2D3-228ENST00000508974 HELZP42694 1942 aaKnown RBP15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 SHISA7A6NL88 538 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 A8MXQ7 604 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 F11P03951 625 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 AVPR1AP37288 418 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 GRIK1P39086 918 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 KPNA1P52294 538 aaPredicted RBP15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 CDH8P55286 799 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 PNOCQ13519 176 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 CFAP221Q4G0U5 840 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 FAM171BQ6P995 826 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 C1orf210Q8IVY1 113 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 SYAP1Q96A49 352 aaPredicted RBP15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 PCED1BQ96HM7 432 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 XYLT2Q9H1B5 865 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 MMRN2Q9H8L6 949 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 CCL26Q9Y258 94 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 FRMD4BQ9Y2L6 1034 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 R4GN57 208 aa15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 ZFHX2Q9C0A1 2572 aaPredicted RBP15.82■□□□□ 0.12
UBE2D3-228ENST00000508974 ARNTLO00327 626 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 CHADO15335 359 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 TADA3O75528 432 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 NOL4O94818 638 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 VNN1O95497 513 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 C4BPAP04003 597 aaKnown RBP15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 NR2F2P24468 414 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 CCNE1P24864 410 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 MYH10P35580 1976 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 NBL1P41271 181 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 NUCB2P80303 420 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 TNK2Q07912 1038 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 FCHO2Q0JRZ9 810 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 NCOA4Q13772 614 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 ASCL5Q7RTU5 278 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 SLC9A9Q8IVB4 645 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 CMTM8Q8IZV2 173 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 BPIFB1Q8TDL5 484 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 FAM3CQ92520 227 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 MRPS31Q92665 395 aaKnown RBP15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 FUBP3Q96I24 572 aaKnown RBP eCLIP15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 GTSE1Q9NYZ3 720 aa15.81■□□□□ 0.12
UBE2D3-228ENST00000508974 CACNA1IQ9P0X4 2223 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms