RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 XXYLT1Q8NBI6 393 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 CCDC26Q8TAB7 109 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 RSPRY1Q96DX4 576 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 SPATA17Q96L03 361 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 MAGEC2Q9UBF1 373 aaPredicted RBP14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 USP25Q9UHP3 1055 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 SIX4Q9UIU6 781 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 GMEB2Q9UKD1 530 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 GTF3C4Q9UKN8 822 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 SMG5Q9UPR3 1016 aaKnown RBP14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 COL4A3Q01955 1670 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 OBSL1O75147 1896 aa14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 KIF26AQ9ULI4 1882 aaPredicted RBP14.57□□□□□ -0.08
CCHCR1-227ENST00000508852 TRAV19A0A0A6YYK7 116 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 PRR5-ARHGAP8B1AHC4 643 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 FOXD2O60548 495 aaPredicted RBP14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 F13A1P00488 732 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 MYL1P05976 194 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 USP17L7P0C7H9 530 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 WARSP23381 471 aaKnown RBP14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 ANXA13P27216 316 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 HOXA6P31267 233 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 ATICP31939 592 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 ARHGAP8P85298 464 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 GRSF1Q12849 480 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 PSMD2Q13200 908 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 PUM1Q14671 1186 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 PSMD6Q15008 389 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 BMT2Q1RMZ1 405 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 SOWAHAQ2M3V2 549 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 SHC4Q6S5L8 630 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 LIMS2Q7Z4I7 341 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 KIAA2013Q8IYS2 634 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 KIAA1958Q8N8K9 716 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 MAB21L3Q8N8X9 362 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 PKMYT1Q99640 499 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 FGFBP2Q9BYJ0 223 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 SNX25Q9H3E2 840 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 AGPAT3Q9NRZ7 376 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 TMLHEQ9NVH6 421 aa14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 MAGED2Q9UNF1 606 aaPredicted RBP14.56□□□□□ -0.08
CCHCR1-227ENST00000508852 TRIM66O15016 1216 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 LRP3O75074 770 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 TACC1O75410 805 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 STAU1O95793 577 aaKnown RBP14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 TDGF1P13385 188 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 CYP2F1P24903 491 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 WNT7BP56706 349 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 TNNC1P63316 161 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 FAM160A1Q05DH4 1040 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 EHHADHQ08426 723 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 NR1H3Q13133 447 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 TRPC3Q13507 836 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 RUNX3Q13761 415 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 RESP18Q5W5W9 173 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 LAIR1Q6GTX8 287 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 TRAPPC11Q7Z392 1133 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 LONP2Q86WA8 852 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 CBWD2Q8IUF1 395 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 ZSWIM2Q8NEG5 633 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 MMS19Q96T76 1030 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 CGRRF1Q99675 332 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 FAM83CQ9BQN1 747 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 SYT15Q9BQS2 421 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 GKN1Q9NS71 199 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 GTSE1Q9NYZ3 720 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 NCANO14594 1321 aa14.55□□□□□ -0.08
CCHCR1-227ENST00000508852 TGFB1I1O43294 461 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 KIF20AO95235 890 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 DLATP10515 647 aaKnown RBP14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 TCF3P15923 654 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 DRD1P21728 446 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 ACAT1P24752 427 aaKnown RBP14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 GNL1P36915 607 aaPredicted RBP14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 LMNB2Q03252 620 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 CYP24A1Q07973 514 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 CCINQ13939 588 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 DDR2Q16832 855 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 KNOP1Q1ED39 458 aaKnown RBP14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 FBXO43Q4G163 708 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 TSSK4Q6SA08 328 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 TMEM150AQ86TG1 271 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 SCN4BQ8IWT1 228 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 CPA6Q8N4T0 437 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 OR5B17Q8NGF7 314 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 MYCBPAPQ8TBZ2 947 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 TMEM174Q8WUU8 243 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 SCFD1Q8WVM8 642 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 LRRC3BQ96PB8 259 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
CCHCR1-227ENST00000508852 GREB1Q4ZG55 1949 aa14.53□□□□□ -0.08
CCHCR1-227ENST00000508852 ATP8B3O60423 1300 aa14.53□□□□□ -0.08
CCHCR1-227ENST00000508852 CCDC163A0A0D9SF12 145 aa14.53□□□□□ -0.08
CCHCR1-227ENST00000508852 TRDMT1O14717 391 aaKnown RBP14.53□□□□□ -0.08
CCHCR1-227ENST00000508852 SLFN14P0C7P3 912 aa14.53□□□□□ -0.08
CCHCR1-227ENST00000508852 TRIM21P19474 475 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms