RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RFC2P35250 354 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 AFMP43652 599 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 SLC12A3P55017 1021 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 NPEPPSP55786 919 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 SOX10P56693 466 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 IGBP1P78318 339 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 TLE2Q04725 743 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 TFDP1Q14186 410 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 EMC2Q15006 297 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 PPP2R5AQ15172 486 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 ZRSR1Q15695 479 aaKnown RBP6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 TRIM60Q495X7 471 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 SPECC1Q5M775 1068 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 RINT1Q6NUQ1 792 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 EFCAB12Q6NXP0 572 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 C1orf186Q6ZWK4 172 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 USP49Q70CQ1 688 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 SPATC1Q76KD6 591 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 ZNF410Q86VK4 478 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 ZSWIM9Q86XI8 627 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 LILRB2Q8N423 598 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 LINC01465Q8N7H1 131 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 FSIP1Q8NA03 581 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 USP38Q8NB14 1042 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 THAP3Q8WTV1 239 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 PSPC1Q8WXF1 523 aaKnown RBP6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 KCNN1Q92952 543 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 CCDC47Q96A33 483 aaKnown RBP6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 IFT74Q96LB3 600 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 INO80BQ9C086 356 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 RNF32Q9H0A6 362 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 SETD4Q9NVD3 440 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 WHRNQ9P202 907 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 LARSQ9P2J5 1176 aaKnown RBP6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 SEL1LQ9UBV2 794 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 RNF114Q9Y508 228 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 NR2E3Q9Y5X4 410 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 FHOD1Q9Y613 1164 aa6.04□□□□□ -1.44
HMGB1P44-201ENST00000508597 PVALEFA0A1B0GWK0 134 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PQBP1O60828 265 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 KINO60870 393 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 MBD3O95983 291 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PFKMP08237 780 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 GSTM1P09488 218 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 GAP43P17677 238 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 ARL2P36404 184 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 NDUFA8P51970 172 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 LONRF2Q1L5Z9 754 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 LRRC26Q2I0M4 334 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 TRIM71Q2Q1W2 868 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PLA2G4FQ68DD2 849 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 KRBA2Q6ZNG9 492 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 TRMT1LQ7Z2T5 733 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 KCNK18Q7Z418 384 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 SRGAP1Q7Z6B7 1085 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 ADAT2Q7Z6V5 191 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 GPBP1Q86WP2 473 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 CCDC65Q8IXS2 484 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 KIAA0319LQ8IZA0 1049 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 METTL13Q8N6R0 699 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PDILTQ8N807 584 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 CNNM3Q8NE01 707 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PDZD8Q8NEN9 1154 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 ENGASEQ8NFI3 743 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 MYLIPQ8WY64 445 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 DHX58Q96C10 678 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 CTAGE1Q96RT6 745 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PLCD4Q9BRC7 762 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 NTPCRQ9BSD7 190 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 NFKBIZQ9BYH8 718 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 C2orf40Q9H1Z8 148 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 PARVGQ9HBI0 331 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 LMBRD1Q9NUN5 540 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 TRMT13Q9NUP7 481 aaKnown RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 ERVK13-1Q9NX77 482 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 SUCLA2Q9P2R7 463 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 TBX21Q9UL17 535 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 ATP11BQ9Y2G3 1177 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 COL4A3BPQ9Y5P4 624 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 ALPK3Q96L96 1907 aa6.03□□□□□ -1.44
HMGB1P44-201ENST00000508597 A0A087X0B3 334 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 SSU72P8A0A1W2PR75 194 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 FRMD3A2A2Y4 597 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 RSPH10B2B2RC85 870 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 AGRPO00253 132 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 BIN1O00499 593 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 TBX1O43435 398 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 USO1O60763 962 aaKnown RBP6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 TBCAO75347 108 aaKnown RBP6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 SMC2O95347 1197 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 TIMP1P01033 207 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 KRT18P05783 430 aaKnown RBP6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 GSNP06396 782 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 RSPH10BP0C881 870 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 CKBP12277 381 aa6.02□□□□□ -1.45
HMGB1P44-201ENST00000508597 ITGA4P13612 1032 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms