RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TMEM35BQ8NCS4 154 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 TFAP2BQ92481 460 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 PPP2R3CQ969Q6 453 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 MYLPFQ96A32 169 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 PGLYRP2Q96PD5 576 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 TMEM209Q96SK2 561 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 CHP1Q99653 195 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 RTP3Q9BQQ7 232 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 LMAN2LQ9H0V9 348 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 CRTAC1Q9NQ79 661 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 ARHGAP20Q9P2F6 1191 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 ADAMTS1Q9UHI8 967 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
BRCC3P1-201ENST00000508559 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 TMCO5BA8MYB1 307 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 O00370 1275 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 CLDN5O00501 218 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 PRRG1O14668 218 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ARHGAP6O43182 974 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 LSM8O95777 96 aaKnown RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 EFEMP2O95967 443 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 BDNFP23560 247 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 GRIK1P39086 918 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 NSFP46459 744 aaKnown RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 KIF11P52732 1056 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 BCAT1P54687 386 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ERVFC1P60507 584 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 BST2Q10589 180 aaKnown RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 GPR17Q13304 367 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 LRIT3Q3SXY7 679 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 CCDC122Q5T0U0 273 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 NAA35Q5VZE5 725 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 HGSNATQ68CP4 663 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ARHGAP17Q68EM7 881 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 PPP1R2P3Q6NXS1 205 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 DENND1BQ6P3S1 775 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ELMSAN1Q6PJG2 1045 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 SCN4BQ8IWT1 228 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 RNF168Q8IYW5 571 aaPredicted RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 UBA3Q8TBC4 463 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 C2orf15Q8WU43 125 aaKnown RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 PCED1BQ96HM7 432 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ZNF830Q96NB3 372 aaPredicted RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 SEPT5Q99719 369 aaPredicted RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 HNRNPABQ99729 332 aaKnown RBP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 B3GNT5Q9BYG0 378 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 PRO3102Q9H379 93 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 ST7Q9NRC1 585 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
BRCC3P1-201ENST00000508559 KIAA1671Q9BY89 1806 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 FAM170AA1A519 330 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 SETSIPP0DME0 302 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 CHRNB2P17787 502 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 MAP3K7CLP57077 242 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 FMO1Q01740 532 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 ROR1Q01973 937 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 ADCY1Q08828 1119 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 TAF12Q16514 161 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 CCDC142Q17RM4 750 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 CLEC16AQ2KHT3 1053 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 MGAT5BQ3V5L5 792 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 TPGS2Q68CL5 300 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 FAM171BQ6P995 826 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 TXLNBQ8N3L3 684 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 MRPL43Q8N983 215 aaKnown RBP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 SPPL2BQ8TCT7 592 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 IPO4Q8TEX9 1081 aaKnown RBP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 CPA5Q8WXQ8 436 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 FUBP3Q96I24 572 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 CLSTN3Q9BQT9 956 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 DUSP16Q9BY84 665 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 ZNF518BQ9C0D4 1074 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 MIS12Q9H081 205 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 ZNF576Q9H609 170 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 CYP4F11Q9HBI6 524 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 RXFP1Q9HBX9 757 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 DMAP1Q9NPF5 467 aaPredicted RBP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 SPTLC3Q9NUV7 552 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 TMLHEQ9NVH6 421 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 AFF4Q9UHB7 1163 aaKnown RBP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
BRCC3P1-201ENST00000508559 NLRC5Q86WI3 1866 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 MTMR11A4FU01 709 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 C2orf71A6NGG8 1288 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 307.9 ms