RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RUVBL1Q9Y265 456 aaKnown RBP5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 CHD4Q14839 1912 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 DISP2A7MBM2 1401 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 SPATA31A3Q5VYP0 1347 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 SPHKAPQ2M3C7 1700 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 DUOX2Q9NRD8 1548 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 TMCO5BA8MYB1 307 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 MYO1CO00159 1063 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 PES1O00541 588 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 BRINP1O60477 761 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 ERN1O75460 977 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 EIF3JO75822 258 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 IGHDP01880 384 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 CKBP12277 381 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 OSMP13725 252 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 MAP2K2P36507 400 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 GPR3P46089 330 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 SLC6A9P48067 706 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 HNRNPH2P55795 449 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 GSCP56915 257 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 IRX1P78414 480 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 MRPS35P82673 323 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 SARNPP82979 210 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 STAT4Q14765 748 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 CCDC183Q5T5S1 534 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 LRCH2Q5VUJ6 765 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 JAKMIP3Q5VZ66 844 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 SEM1Q6ZVN7 128 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 EFCAB13Q8IY85 973 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 TBC1D22AQ8WUA7 517 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 STAG1Q8WVM7 1258 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 CASKIN2Q8WXE0 1202 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 PTCD3Q96EY7 689 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 MARS2Q96GW9 593 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 AIFM2Q9BRQ8 373 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 UNKLQ9H9P5 680 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 FAM30AQ9NZY2 134 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 FOXJ2Q9P0K8 574 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 PCDHGA2Q9Y5H1 932 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 RGPD1P0DJD0 1748 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 MARF1Q9Y4F3 1742 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 PTPRCP08575 1304 aa5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 COL22A1Q8NFW1 1626 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-211ENST00000508531 NRKQ7Z2Y5 1582 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 LOC102724159A0A0B4J2E5 919 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 SYCE3A1L190 88 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ERICH4A6NGS2 130 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 TEX33O43247 280 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 GPR32O75388 356 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ZFPL1O95159 310 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 SLU7O95391 586 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 MATN4O95460 622 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ADCY5O95622 1261 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 RARRES1P49788 294 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 NOMO3P69849 1222 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 TMF1P82094 1093 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 PWP2Q15269 919 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ZSCAN26Q16670 478 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 NOMO2Q5JPE7 1267 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 TMCO3Q6UWJ1 677 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 MMS22LQ6ZRQ5 1243 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 LHFPL2Q6ZUX7 228 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 SRLQ86TD4 932 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 NOP9Q86U38 636 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ERC1Q8IUD2 1116 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 AFAP1L2Q8N4X5 818 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 OR2I1PQ8NGU4 316 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ACTRT2Q8TDY3 377 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 ZNF384Q8TF68 577 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 CHAC2Q8WUX2 184 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 GCC1Q96CN9 775 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 AHCYL2Q96HN2 611 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 PSMD1Q99460 953 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 CXorf56Q9H5V9 222 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 CCM2LQ9NUG4 571 aaPredicted RBP5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 HSFX1Q9UBD0 423 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 DNM3Q9UQ16 869 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 PXDNQ92626 1479 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 SPATA31A5Q5VU36 1347 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 SPATA31A7Q8IWB4 1347 aa5.18□□□□□ -1.58
PDLIM5-211ENST00000508531 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 ARHGEF5Q12774 1597 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 TMEM131LA2VDJ0 1609 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 TCRBV7S2A1N4TA0A589 114 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 CDHR4A6H8M9 788 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 RPS6KA5O75582 802 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 PRKD3O94806 890 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 TUBBP07437 444 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 CDK4P11802 303 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 VAV2P52735 878 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 SLC5A3P53794 718 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 MGAT2Q10469 447 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 MTM1Q13496 603 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 MVPQ14764 893 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 GEN1Q17RS7 908 aa5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 CT47A1Q5JQC4 288 aaPredicted RBP5.17□□□□□ -1.58
PDLIM5-211ENST00000508531 TTLL5Q6EMB2 1281 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms