RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 KCNB1Q14721 858 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 HEATR6Q6AI08 1181 aaKnown RBP17.56■□□□□ 0.4
DDR1-263ENST00000508317 POTEHQ6S545 545 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 LRRTM3Q86VH5 581 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 C1orf127Q8N9H9 656 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 SPATA32Q96LK8 384 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 CBWD1Q9BRT8 395 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 STRA6Q9BX79 667 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 SLC46A2Q9BY10 475 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 MTMR12Q9C0I1 747 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
DDR1-263ENST00000508317 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 ARNTLO00327 626 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 EIF3DO15371 548 aaKnown RBP eCLIP17.55■□□□□ 0.4
DDR1-263ENST00000508317 LRP3O75074 770 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 PRAMEF12O95522 483 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 TNNI1P19237 187 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 IFNAR2P48551 515 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 SNRPFP62306 86 aaKnown RBP17.55■□□□□ 0.4
DDR1-263ENST00000508317 TNNC1P63316 161 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 SATB1Q01826 763 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 TRPC3Q13507 836 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 RUNX3Q13761 415 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 LPAL2Q16609 132 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 DDR2Q16832 855 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 DHX58Q96C10 678 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 RSPRY1Q96DX4 576 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 CHAMP1Q96JM3 812 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 SMG9Q9H0W8 520 aaKnown RBP17.55■□□□□ 0.4
DDR1-263ENST00000508317 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
DDR1-263ENST00000508317 GTF3C4Q9UKN8 822 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 CDH9Q9ULB4 789 aa17.55■□□□□ 0.4
DDR1-263ENST00000508317 FRMD3A2A2Y4 597 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 CHURC1-FNTBB4DL54 471 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 CUTAO60888 179 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 PHACTR2O75167 634 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 PAPSS2O95340 614 aaPredicted RBP17.54■□□□□ 0.4
DDR1-263ENST00000508317 ACAT1P24752 427 aaKnown RBP17.54■□□□□ 0.4
DDR1-263ENST00000508317 CYP2F1P24903 491 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 GRIK1P39086 918 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 ME1P48163 572 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 FNTBP49356 437 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 TNK2Q07912 1038 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
DDR1-263ENST00000508317 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 FBXO43Q4G163 708 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 TXNDC8Q6A555 127 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 VSTM1Q6UX27 236 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 WDR49Q8IV35 697 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 TRMT2BQ96GJ1 504 aaKnown RBP17.54■□□□□ 0.4
DDR1-263ENST00000508317 CEP295NLQ96MC4 621 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 INTS13Q9NVM9 706 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 HSPBP1Q9NZL4 362 aa17.54■□□□□ 0.4
DDR1-263ENST00000508317 CGNQ9P2M7 1197 aaKnown RBP17.54■□□□□ 0.4
DDR1-263ENST00000508317 MYH11P35749 1972 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 NRG2O14511 850 aaPredicted RBP17.53■□□□□ 0.4
DDR1-263ENST00000508317 F11P03951 625 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 CCDC192P0DO97 292 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 DLATP10515 647 aaKnown RBP17.53■□□□□ 0.4
DDR1-263ENST00000508317 DRD1P21728 446 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 CASP5P51878 434 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 CYP27A1Q02318 531 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 FAM26FQ5R3K3 315 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 CEP57L1Q8IYX8 460 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 ZNF687Q8N1G0 1237 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 SYT15Q9BQS2 421 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 RTKNQ9BST9 563 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 MKNK1Q9BUB5 465 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 IKZF4Q9H2S9 585 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 EBF3Q9H4W6 596 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 IL21Q9HBE4 155 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 DUS2Q9NX74 493 aaKnown RBP17.53■□□□□ 0.4
DDR1-263ENST00000508317 TRPM5Q9NZQ8 1165 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 PCDHA7Q9UN72 937 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
DDR1-263ENST00000508317 ATP8B3O60423 1300 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 UBE4BO95155 1302 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 OTOGLQ3ZCN5 2332 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 TRIM66O15016 1216 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 NOL4O94818 638 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 HOXA6P31267 233 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 MAGEA11P43364 429 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 PPP3CCP48454 512 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 SPEM2Q0P670 501 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 GOLGA5Q8TBA6 731 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 USP13Q92995 863 aaPredicted RBP17.52■□□□□ 0.4
DDR1-263ENST00000508317 ACDQ96AP0 544 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 P2RY13Q9BPV8 354 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 TRIM9Q9C026 710 aa17.52■□□□□ 0.4
DDR1-263ENST00000508317 MIA3Q5JRA6 1907 aa17.51■□□□□ 0.39
DDR1-263ENST00000508317 TPRP12270 2363 aaKnown RBP17.51■□□□□ 0.39
DDR1-263ENST00000508317 SHISA7A6NL88 538 aa17.51■□□□□ 0.39
DDR1-263ENST00000508317 ACACBO00763 2458 aa17.51■□□□□ 0.39
DDR1-263ENST00000508317 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
DDR1-263ENST00000508317 PFKLP17858 780 aa17.51■□□□□ 0.39
DDR1-263ENST00000508317 HDCP19113 662 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms