RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SYT15Q9BQS2 421 aa15.3■□□□□ 0.04
RAB28-205ENST00000508274 SLC38A8A6NNN8 435 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 DPYSL4O14531 572 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 CHADO15335 359 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 PDGFRBP09619 1106 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 CCNE1P24864 410 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 FAM171BQ6P995 826 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 DPH6Q7L8W6 267 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 SPATA2LQ8IUW3 424 aaPredicted RBP15.29■□□□□ 0.04
RAB28-205ENST00000508274 MAB21L3Q8N8X9 362 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 TTC8Q8TAM2 541 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 MYLPFQ96A32 169 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 NELL2Q99435 816 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 MRPL45Q9BRJ2 306 aaKnown RBP15.29■□□□□ 0.04
RAB28-205ENST00000508274 ABCB6Q9NP58 842 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 CRTAC1Q9NQ79 661 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 CCL26Q9Y258 94 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 MRPS17Q9Y2R5 130 aaKnown RBP15.29■□□□□ 0.04
RAB28-205ENST00000508274 DCHS1Q96JQ0 3298 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 DMXL1Q9Y485 3027 aa15.29■□□□□ 0.04
RAB28-205ENST00000508274 LAMTOR5O43504 91 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 CSH1P0DML2 217 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 CSH2P0DML3 217 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 WARSP23381 471 aaKnown RBP15.28■□□□□ 0.04
RAB28-205ENST00000508274 SYKP43405 635 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 RPS9P46781 194 aaKnown RBP15.28■□□□□ 0.04
RAB28-205ENST00000508274 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 TXNDC8Q6A555 127 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 SCN4BQ8IWT1 228 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 BPIFB1Q8TDL5 484 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 CSGALNACT1Q8TDX6 532 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 ELMO3Q96BJ8 720 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 KCTD10Q9H3F6 313 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 GOLPH3LQ9H4A5 285 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 GDPD2Q9HCC8 539 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 CGNQ9P2M7 1197 aaKnown RBP15.28■□□□□ 0.04
RAB28-205ENST00000508274 CDH9Q9ULB4 789 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 MAN2B1O00754 1011 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 WEE1P30291 646 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 MYL6P60660 151 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
RAB28-205ENST00000508274 TNK2Q07912 1038 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 MTAPQ13126 283 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 WDR44Q5JSH3 913 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 TSSK4Q6SA08 328 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 CMTM8Q8IZV2 173 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 RIN3Q8TB24 985 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.048e-11■■■■□ 25.8
RAB28-205ENST00000508274 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 DMAC2Q9NW81 257 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 OBP2AQ9NY56 170 aa15.28■□□□□ 0.04
RAB28-205ENST00000508274 GVINP1Q7Z2Y8 2422 aa15.27■□□□□ 0.04
RAB28-205ENST00000508274 HELZP42694 1942 aaKnown RBP15.27■□□□□ 0.04
RAB28-205ENST00000508274 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.03
RAB28-205ENST00000508274 NCAM2O15394 837 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 NOL4O94818 638 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 RPN1P04843 607 aaKnown RBP15.27■□□□□ 0.03
RAB28-205ENST00000508274 BDNFP23560 247 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 MAGEA9P43362 315 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 KPNA1P52294 538 aaPredicted RBP15.27■□□□□ 0.03
RAB28-205ENST00000508274 CYP27A1Q02318 531 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 CSTF1Q05048 431 aaKnown RBP15.27■□□□□ 0.03
RAB28-205ENST00000508274 PSMD2Q13200 908 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 WDR72Q3MJ13 1102 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 ARHGAP29Q52LW3 1261 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.03
RAB28-205ENST00000508274 TXNDC11Q6PKC3 985 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 FSIP1Q8NA03 581 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 OR6B3Q8NGW1 331 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 USP13Q92995 863 aaPredicted RBP15.27■□□□□ 0.03
RAB28-205ENST00000508274 PCED1BQ96HM7 432 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 DPEP3Q9H4B8 488 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 USP25Q9UHP3 1055 aa15.27■□□□□ 0.03
RAB28-205ENST00000508274 CTHP32929 405 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 AVPR1AP37288 418 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 MAGEA11P43364 429 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 TNNC1P63316 161 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 DLG4P78352 724 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 TRPC3Q13507 836 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 MDH1BQ5I0G3 518 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 C4orf50Q6ZRC1 276 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 ADSSL1Q8N142 457 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 CELF5Q8N6W0 485 aaKnown RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 PARD3BQ8TEW8 1205 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 MRPS31Q92665 395 aaKnown RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 TRMT2BQ96GJ1 504 aaKnown RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 MYRFLQ96LU7 910 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 SLC22A12Q96S37 553 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 CHRDQ9H2X0 955 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 LMAN1LQ9HAT1 526 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 RBM12Q9NTZ6 932 aaKnown RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 MAGEC2Q9UBF1 373 aaPredicted RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 NXF1Q9UBU9 619 aaKnown RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 FBXO4Q9UKT5 387 aa15.26■□□□□ 0.03
RAB28-205ENST00000508274 EP300Q09472 2414 aaPredicted RBP15.26■□□□□ 0.03
RAB28-205ENST00000508274 SPECC1L-ADORA2AF8WAN1 911 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms