RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 PRCCQ92733 491 aaPredicted RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 FAM167AQ96KS9 214 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 FOXP3Q9BZS1 431 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 FZD8Q9H461 694 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 DDX56Q9NY93 547 aaKnown RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 GPR25O00155 361 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 CHUKO15111 745 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 B4GALT4O60513 344 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 ERBB2P04626 1255 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 GSTA1P08263 222 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 NFICP08651 508 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 PTPN7P35236 360 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 GPX6P59796 221 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 SURF1Q15526 300 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 GALNTL6Q49A17 601 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 FNBP1LQ5T0N5 605 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 FBXO16Q8IX29 292 aaPredicted RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 CCDC63Q8NA47 563 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 OTUD5Q96G74 571 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 ANKRD36BP1Q96IX9 119 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 RNPEPQ9H4A4 650 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 SMYD3Q9H7B4 428 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 PDGFCQ9NRA1 345 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 METTL5Q9NRN9 209 aaKnown RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 GRID1Q9ULK0 1009 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 ARL2BPQ9Y2Y0 163 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 ACTL7BQ9Y614 415 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 PIK3R2O00459 728 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 LGR5O75473 907 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 CNMDO75829 334 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 KRT15P19012 456 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 KDELR1P24390 212 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 SSTR1P30872 391 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 RPA3P35244 121 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 KCNJ2P63252 427 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 IGBP1P78318 339 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 DHX37Q8IY37 1157 aaKnown RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 C1orf127Q8N9H9 656 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 PITPNM3Q9BZ71 974 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 ASCC2Q9H1I8 757 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 CDT1Q9H211 546 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 TRABDQ9H4I3 376 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 ELP3Q9H9T3 547 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 PCDH9Q9HC56 1237 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 KAT6AQ92794 2004 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 A0A0G2JMZ2 1700 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 LRRC37A2A6NM11 1700 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 TCRBV7S3A2A0A539 114 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 LACTBL1A8MY62 500 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 ASMTLO95671 621 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 CTCFP49711 727 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 NCALDP61601 193 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 DNAJC3Q13217 504 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 EFTUD2Q15029 972 aaKnown RBP eCLIP11.48□□□□□ -0.57
LIN54-207ENST00000508171 RAB6CQ53S08 254 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 ZNF667Q5HYK9 610 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 SH3PXD2AQ5TCZ1 1133 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 PPP1R21Q6ZMI0 780 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 CENPUQ71F23 418 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 DPH6Q7L8W6 267 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 POLNQ7Z5Q5 900 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 PNMA8AQ86V59 439 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 CEP57Q86XR8 500 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 XYLT1Q86Y38 959 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 UNC45BQ8IWX7 931 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 RIBC1Q8N443 379 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 SLC4A11Q8NBS3 891 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 DENND1AQ8TEH3 1009 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 CPT1BQ92523 772 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 TTC25Q96NG3 672 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 BCO2Q9BYV7 579 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 RAB6CQ9H0N0 254 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 C2orf40Q9H1Z8 148 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 LHX5Q9H2C1 402 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 SYNCQ9H7C4 482 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 ECT2Q9H8V3 914 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 RPF1Q9H9Y2 349 aaKnown RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 SLCO1B3Q9NPD5 702 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 STRIP2Q9ULQ0 834 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
LIN54-207ENST00000508171 PPP2R3BQ9Y5P8 575 aa11.48□□□□□ -0.57
LIN54-207ENST00000508171 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 ITGB3P05106 788 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
LIN54-207ENST00000508171 RPL22P35268 128 aaKnown RBP11.47□□□□□ -0.57
LIN54-207ENST00000508171 IL9RQ01113 521 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 MYO1EQ12965 1108 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 BNIP1Q12981 228 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 MTFR1Q15390 333 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 HIF1AQ16665 826 aa11.47□□□□□ -0.57
LIN54-207ENST00000508171 JADE1Q6IE81 842 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms