RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 ELOVL4Q9GZR5 314 aa16.68■□□□□ 0.26
COL1A1-211ENST00000507689 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-211ENST00000507689 NARSO43776 548 aaKnown RBP16.67■□□□□ 0.26
COL1A1-211ENST00000507689 ATP2C2O75185 946 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 GJA1P17302 382 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 ATF6P18850 670 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL1A1-211ENST00000507689 CCR2P41597 374 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 DDR2Q16832 855 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 FAM78AQ5JUQ0 283 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 SCARA3Q6AZY7 606 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 TTC39CQ8N584 583 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 B3GALNT2Q8NCR0 500 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 ST13P5Q8NFI4 369 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-211ENST00000507689 GPR152Q8TDT2 470 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 NELFBQ8WX92 580 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 TRMT61BQ9BVS5 477 aaKnown RBP16.67■□□□□ 0.26
COL1A1-211ENST00000507689 SMOC2Q9H3U7 446 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 SLC2A4RGQ9NR83 387 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 CA14Q9ULX7 337 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 C5orf42Q9H799 3197 aa16.67■□□□□ 0.26
COL1A1-211ENST00000507689 VNN1O95497 513 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 GNA14O95837 355 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 ASS1P00966 412 aaKnown RBP16.66■□□□□ 0.26
COL1A1-211ENST00000507689 BDNFP23560 247 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 AVPR1AP37288 418 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 NOP14P78316 857 aaKnown RBP16.66■□□□□ 0.26
COL1A1-211ENST00000507689 PAK1Q13153 545 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 MORC3Q14149 939 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 TMC8Q8IU68 726 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 FBXL13Q8NEE6 735 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 DEPDC1BQ8WUY9 529 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 PCED1BQ96HM7 432 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
COL1A1-211ENST00000507689 NIF3L1Q9GZT8 377 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 KCNH6Q9H252 994 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 TASP1Q9H6P5 420 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 BRD9Q9H8M2 597 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 CYP3A43Q9HB55 503 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 CRTAC1Q9NQ79 661 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
COL1A1-211ENST00000507689 TRIM49BA6NDI0 452 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 SLC38A8A6NNN8 435 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 HCRTO43612 131 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 PSMC3P17980 439 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 RAP1GAPP47736 663 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 PDE6CP51160 858 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 CDH8P55286 799 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 GPC5P78333 572 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-211ENST00000507689 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-211ENST00000507689 TANGO2Q6ICL3 276 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 FRMD5Q7Z6J6 570 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 FILIP1Q7Z7B0 1213 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 UNC93AQ86WB7 457 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 IRF7Q92985 503 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 SPATA17Q96L03 361 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 PKMYT1Q99640 499 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 ZNF334Q9HCZ1 680 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-211ENST00000507689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL1A1-211ENST00000507689 ARHGEF3Q9NR81 526 aa16.65■□□□□ 0.26
COL1A1-211ENST00000507689 THG1LQ9NWX6 298 aaKnown RBP16.65■□□□□ 0.26
COL1A1-211ENST00000507689 SOBPA7XYQ1 873 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 ZNF263O14978 683 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 GPR15P49685 360 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 CLCN5P51795 746 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 YWHAEP62258 255 aaKnown RBP16.64■□□□□ 0.25
COL1A1-211ENST00000507689 SDHAF4Q5VUM1 108 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 FOXR2Q6PJQ5 311 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 DENND5BQ6ZUT9 1274 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 GAREM2Q75VX8 874 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 CSGALNACT1Q8TDX6 532 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 TRMT2BQ96GJ1 504 aaKnown RBP16.64■□□□□ 0.25
COL1A1-211ENST00000507689 FAXDC2Q96IV6 333 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 ZSWIM3Q96MP5 696 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 RPP25Q9BUL9 199 aaKnown RBP16.64■□□□□ 0.25
COL1A1-211ENST00000507689 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 NUP62CLQ9H1M0 184 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 TRPV4Q9HBA0 871 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 DACH1Q9UI36 760 aa16.64■□□□□ 0.25
COL1A1-211ENST00000507689 NOL4O94818 638 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 CCDC192P0DO97 292 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 AVPR2P30518 371 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 NDST1P52848 882 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 NUBP1P53384 320 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 PMS1P54277 932 aaKnown RBP16.63■□□□□ 0.25
COL1A1-211ENST00000507689 NLRP12P59046 1061 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 CYP4F8P98187 520 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 PRKCQQ04759 706 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 C1orf220Q5T0J3 134 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 SPOPLQ6IQ16 392 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 ACOT1Q86TX2 421 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 CREBRFQ8IUR6 639 aa16.63■□□□□ 0.25
COL1A1-211ENST00000507689 ARID3BQ8IVW6 561 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms