RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SSTR1P30872 391 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 RPL26P61254 145 aaKnown RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 HP1BP3Q5SSJ5 553 aaPredicted RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 SLC39A4Q6P5W5 647 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 CAPN12Q6ZSI9 719 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 CHURC1Q8WUH1 139 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 CPT1BQ92523 772 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 WASF2Q9Y6W5 498 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 MYH9P35579 1960 aaKnown RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 SPAG6O75602 509 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 GH2P01242 217 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 ATF7P17544 494 aaPredicted RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 AMPD1P23109 780 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 CDKN2BP42772 138 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 NPTX2P47972 431 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 HSD17B4P51659 736 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 TAP1Q03518 808 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 TCP10Q12799 353 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 DMP1Q13316 513 aaPredicted RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 EFTUD2Q15029 972 aaKnown RBP eCLIP18.61■□□□□ 0.57
NUP54-205ENST00000507257 CNPY1Q3B7I2 92 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 ZACNQ401N2 412 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 KAZNQ674X7 775 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 SMYD5Q6GMV2 418 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 PTF1AQ7RTS3 328 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 PHLDB2Q86SQ0 1253 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 ANKMY2Q8IV38 441 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 SCUBE1Q8IWY4 988 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 SAMD3Q8N6K7 520 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 NIPA2Q8N8Q9 360 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 TTC13Q8NBP0 860 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.61■□□□□ 0.57
NUP54-205ENST00000507257 APBB2Q92870 758 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 PRR11Q96HE9 360 aaPredicted RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 FAM161BQ96MY7 647 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 NDE1Q9NXR1 346 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 ASTN2O75129 1339 aaPredicted RBP18.6■□□□□ 0.57
NUP54-205ENST00000507257 SGK1O00141 431 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 CALCAP01258 141 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 MMP8P22894 467 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 ABCD1P33897 745 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 XIAPP98170 497 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 LIN52Q52LA3 116 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 ACAD11Q709F0 780 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 POLNQ7Z5Q5 900 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 B4GALNT2Q8NHY0 566 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 FNBP1Q96RU3 617 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 WDR83Q9BRX9 315 aaKnown RBP18.6■□□□□ 0.57
NUP54-205ENST00000507257 PI4K2AQ9BTU6 479 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 NMUR2Q9GZQ4 415 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 AGO4Q9HCK5 861 aaKnown RBP18.6■□□□□ 0.57
NUP54-205ENST00000507257 TBC1D22BQ9NU19 505 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 STK32BQ9NY57 414 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 ZNRF3Q9ULT6 936 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
NUP54-205ENST00000507257 TCRBV5S1A1TA0A578 114 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 B2RBV5 119 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 DDX39AO00148 427 aaKnown RBP18.59■□□□□ 0.57
NUP54-205ENST00000507257 PENKP01210 267 aaPredicted RBP18.59■□□□□ 0.57
NUP54-205ENST00000507257 GJC1P36383 396 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 GHRHRQ02643 423 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 C2CD6Q53TS8 623 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 BRDTQ58F21 947 aaPredicted RBP18.59■□□□□ 0.57
NUP54-205ENST00000507257 FNBP1LQ5T0N5 605 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 IZUMO2Q6UXV1 221 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 FBXO36Q8NEA4 188 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 RAB3IL1Q8TBN0 382 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 SLC44A1Q8WWI5 657 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 POMGNT1Q8WZA1 660 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 ITFG2Q969R8 447 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 MRRFQ96E11 262 aaKnown RBP18.59■□□□□ 0.57
NUP54-205ENST00000507257 MIS12Q9H081 205 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 GPRC5CQ9NQ84 441 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 TAGLN3Q9UI15 199 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 SORCS3Q9UPU3 1222 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 SSX2IPQ9Y2D8 614 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 UBIAD1Q9Y5Z9 338 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PI4K2BG5E9Z4 385 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 ENTPD3O75355 529 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 CALB1P05937 261 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PABPC4LP0CB38 370 aaKnown RBP18.59■□□□□ 0.57
NUP54-205ENST00000507257 GNA15P30679 374 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PSMC5P62195 406 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 JAG1P78504 1218 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PIGHQ14442 188 aaPredicted RBP18.59■□□□□ 0.57
NUP54-205ENST00000507257 PSMD6Q15008 389 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 MSS51Q4VC12 460 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 ATP13A4Q4VNC1 1196 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 TTC7BQ86TV6 843 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 RHPN2Q8IUC4 686 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PALM2Q8IXS6 379 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PDIK1LQ8N165 341 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 ZNF516Q92618 1163 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 PANX3Q96QZ0 392 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 TMEM121Q9BTD3 319 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 WWP1Q9H0M0 922 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 MKS1Q9NXB0 559 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 IVNS1ABPQ9Y6Y0 642 aa18.59■□□□□ 0.57
NUP54-205ENST00000507257 C4BPAP04003 597 aaKnown RBP18.58■□□□□ 0.56
NUP54-205ENST00000507257 BGNP21810 368 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms