RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 MAGEC2Q9UBF1 373 aaPredicted RBP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 PTPN2P17706 415 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 BDNFP23560 247 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 CCR2P41597 374 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 EPHB3P54753 998 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 CUL2Q13617 745 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 MAPRE1Q15691 268 aaKnown RBP19.36■□□□□ 0.69
NPHP4-210ENST00000506941 SDHAF4Q5VUM1 108 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 C4orf50Q6ZRC1 276 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 GET4Q7L5D6 327 aaPredicted RBP19.36■□□□□ 0.69
NPHP4-210ENST00000506941 ARHGEF19Q8IW93 802 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 CRYBG2Q8N1P7 616 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 ELMOD1Q8N336 334 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 AOPEPQ8N6M6 819 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 UBR7Q8N806 425 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 EHBP1Q8NDI1 1231 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 ITFG1Q8TB96 612 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 GPR152Q8TDT2 470 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 MYADMQ96S97 322 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 TUBGCP2Q9BSJ2 902 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 CRACR2AQ9BSW2 395 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 LRRC3Q9BY71 257 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 ELOVL4Q9GZR5 314 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 HSD3B7Q9H2F3 369 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 CISHQ9NSE2 258 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 TMEM30AQ9NV96 361 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 GCNT4Q9P109 453 aa19.36■□□□□ 0.69
NPHP4-210ENST00000506941 HELZP42694 1942 aaKnown RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 CLDN5O00501 218 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 LETM1O95202 739 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 PRKCSHP14314 528 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 FSHRP23945 695 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 EEF1GP26641 437 aaKnown RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 MAGEA11P43364 429 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 CACNA2D1P54289 1103 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 EPHA5P54756 1037 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 CETN1Q12798 172 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 DDR2Q16832 855 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 ZSCAN23Q3MJ62 389 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 PRSS36Q5K4E3 855 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 PAQR9Q6ZVX9 377 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 TMC8Q8IU68 726 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 GJD3Q8N144 294 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 C12orf29Q8N999 325 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 GIPC2Q8TF65 315 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 KAT5Q92993 513 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 PSMG2Q969U7 264 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 TCEAL4Q96EI5 215 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 TNIP3Q96KP6 325 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 ZNF512Q96ME7 567 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 NT5C1BQ96P26 610 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 ZNF518BQ9C0D4 1074 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 ZNF334Q9HCZ1 680 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 AVENQ9NQS1 362 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-210ENST00000506941 USTQ9Y2C2 406 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 NR2E1Q9Y466 385 aa19.35■□□□□ 0.69
NPHP4-210ENST00000506941 CCDC130P13994 396 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 SSTR3P32745 418 aaPredicted RBP19.34■□□□□ 0.69
NPHP4-210ENST00000506941 APBA1Q02410 837 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 VWA3BQ502W6 1294 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 IQCEQ6IPM2 695 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 POTEHQ6S545 545 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 DNAJB7Q7Z6W7 309 aaPredicted RBP19.34■□□□□ 0.69
NPHP4-210ENST00000506941 DHX40Q8IX18 779 aaKnown RBP19.34■□□□□ 0.69
NPHP4-210ENST00000506941 FUKQ8N0W3 1084 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 TDRD5Q8NAT2 981 aaKnown RBP19.34■□□□□ 0.69
NPHP4-210ENST00000506941 BPIFA3Q9BQP9 254 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 NT5C1AQ9BXI3 368 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 NDST4Q9H3R1 872 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 FAM49BQ9NUQ9 324 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 TAB2Q9NYJ8 693 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 ASB3Q9Y575 518 aa19.34■□□□□ 0.69
NPHP4-210ENST00000506941 MOSPD3O75425 235 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 CEBPBP17676 345 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 SLC9A1P19634 815 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 TBXAS1P24557 533 aaPredicted RBP19.33■□□□□ 0.68
NPHP4-210ENST00000506941 RAD23BP54727 409 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 MTMR3Q13615 1198 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 KRT31Q15323 416 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 ZNF394Q53GI3 561 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 PHLDB3Q6NSJ2 640 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 TRIM65Q6PJ69 517 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 VSTM1Q6UX27 236 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 GBP6Q6ZN66 633 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 RRAGAQ7L523 313 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 OTOP3Q7RTS5 596 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 FAM35AQ86V20 835 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 SCN4BQ8IWT1 228 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 SLC4A11Q8NBS3 891 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 FAM200AQ8TCP9 573 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 ING5Q8WYH8 240 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 KREMEN1Q96MU8 473 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 FAM124BQ9H5Z6 455 aaPredicted RBP19.33■□□□□ 0.68
NPHP4-210ENST00000506941 ASAH2Q9NR71 780 aa19.33■□□□□ 0.68
NPHP4-210ENST00000506941 GTPBP10A4D1E9 387 aaKnown RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 MYL4P12829 197 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 ZNF18P17022 549 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 HMGA1P17096 107 aaKnown RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 ACO1P21399 889 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms