RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TARSP26639 723 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 GDI1P31150 447 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 MAGEA11P43364 429 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 GPR15P49685 360 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 MLLT6P55198 1093 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 NLRP12P59046 1061 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CYP4F8P98187 520 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 DPYDQ12882 1025 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 FZD5Q13467 585 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 GPR158Q5T848 1215 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 FSIP1Q8NA03 581 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 FAM200AQ8TCP9 573 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 GIPC2Q8TF65 315 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CCDC127Q96BQ5 260 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 TRMT2BQ96GJ1 504 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 MYRFLQ96LU7 910 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 NELL2Q99435 816 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 SYT15Q9BQS2 421 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CRTAC1Q9NQ79 661 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CDH9Q9ULB4 789 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 NME7Q9Y5B8 376 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 GVINP1Q7Z2Y8 2422 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 FAM170BA6NMN3 283 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 LRRIQ3A6PVS8 624 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 SOBPA7XYQ1 873 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF263O14978 683 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 ATP2C2O75185 946 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 TADA3O75528 432 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 C4BPAP04003 597 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 ATICP31939 592 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 MAGEA9P43362 315 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 RPS9P46781 194 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 CASP4P49662 377 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 MYL6P60660 151 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 RPL10AP62906 217 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 KCNB1Q14721 858 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 UBXN2BQ14CS0 331 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 NFIL3Q16649 462 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 DDR2Q16832 855 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 ARHGAP15Q53QZ3 475 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 SDHAF4Q5VUM1 108 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 TDRD10Q5VZ19 366 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF852Q6ZMS4 543 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 C1orf210Q8IVY1 113 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 MAML2Q8IZL2 1156 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 STKLD1Q8NE28 680 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 MRPL45Q9BRJ2 306 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 SLC46A2Q9BY10 475 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 ZMYND15Q9H091 742 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 TRAF3IP3Q9Y228 551 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 R3HCC1Q9Y3T6 440 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 FANCMQ8IYD8 2048 aa9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 PTPRZ1P23471 2315 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-209ENST00000506632 GREB1Q4ZG55 1949 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 PRR23AA6NEV1 266 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 SLC38A8A6NNN8 435 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MAN2B1O00754 1011 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MAPK13O15264 365 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF202O95125 648 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 VNN1O95497 513 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 NR3C1P04150 777 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 AP3M2P53677 418 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MCCD1P59942 119 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 BECN1Q14457 450 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MAPRE1Q15691 268 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 TAF12Q16514 161 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 WDR72Q3MJ13 1102 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 ARHGAP29Q52LW3 1261 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 C1orf220Q5T0J3 134 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 VSTM1Q6UX27 236 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 C4orf50Q6ZRC1 276 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 FRMD5Q7Z6J6 570 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 SPATA2LQ8IUW3 424 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 CMTM8Q8IZV2 173 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 GUF1Q8N442 669 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MYCBPAPQ8TBZ2 947 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MYLPFQ96A32 169 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 SYAP1Q96A49 352 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MSANTD3Q96H12 275 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 SPATA17Q96L03 361 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 CEP295NLQ96MC4 621 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MMS19Q96T76 1030 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 BCO2Q9BYV7 579 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 UXTQ9UBK9 157 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 MRPS17Q9Y2R5 130 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 PIAS3Q9Y6X2 628 aa9.7□□□□□ -0.86
PDLIM5-209ENST00000506632 DPYSL4O14531 572 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 NCAM2O15394 837 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 GFRA3O60609 400 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 KIF20AO95235 890 aa9.69□□□□□ -0.86
PDLIM5-209ENST00000506632 PDGFRBP09619 1106 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms