RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 MYLPFQ96A32 169 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 TSG101Q99816 390 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 VRTNQ9H8Y1 702 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 PCDHA5Q9Y5H7 936 aa16.64■□□□□ 0.25
CLDND1-211ENST00000506575 NUP210Q8TEM1 1887 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-211ENST00000506575 CETN3O15182 167 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-211ENST00000506575 PI15O43692 258 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 VNN1O95497 513 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 PIK3CAP42336 1068 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 PRCPP42785 496 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 PRKCQQ04759 706 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 ZCWPW2Q504Y3 356 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 MDH1BQ5I0G3 518 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 SDHAF4Q5VUM1 108 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 VSTM1Q6UX27 236 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 VITQ6UXI7 678 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 SCARA5Q6ZMJ2 495 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 SV2AQ7L0J3 742 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 MFSD6LQ8IWD5 586 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 MYCBPAPQ8TBZ2 947 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 TAF4BQ92750 862 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 IRF7Q92985 503 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 IRF2BPLQ9H1B7 796 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 IL21Q9HBE4 155 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 CRTAC1Q9NQ79 661 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 UXTQ9UBK9 157 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-211ENST00000506575 ZMYM5Q9UJ78 669 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 CACNA1HO95180 2353 aa16.63■□□□□ 0.25
CLDND1-211ENST00000506575 DENND4CQ5VZ89 1909 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 SLC38A8A6NNN8 435 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 HEPACAM2A8MVW5 462 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 ZNF263O14978 683 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 PTPN1P18031 435 aaKnown RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 BDNFP23560 247 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 ANXA13P27216 316 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 GDI1P31150 447 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 GRIK1P39086 918 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 NLRP12P59046 1061 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 STARD6P59095 220 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 NHLH1Q02575 133 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 ENPEPQ07075 957 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 STIM1Q13586 685 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 COBLL1Q53SF7 1204 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 ARID3BQ8IVW6 561 aaPredicted RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 STKLD1Q8NE28 680 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 SPATA20Q8TB22 786 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 MRPS31Q92665 395 aaKnown RBP16.62■□□□□ 0.25
CLDND1-211ENST00000506575 DNASE1L2Q92874 299 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 PCED1BQ96HM7 432 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 TASP1Q9H6P5 420 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 MMRN2Q9H8L6 949 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 SIT1Q9Y3P8 196 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 PTPRDP23468 1912 aa16.62■□□□□ 0.25
CLDND1-211ENST00000506575 MIA3Q5JRA6 1907 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 TRIM66O15016 1216 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 STX10O60499 249 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
CLDND1-211ENST00000506575 NOL4O94818 638 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 HLA-DRAP01903 254 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 F11P03951 625 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 TRIM49P0CI25 452 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 TRIM49CP0CI26 452 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 DDX6P26196 483 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLDND1-211ENST00000506575 AVPR1AP37288 418 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 RAP1GAPP47736 663 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 GCLMP48507 274 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 CDH8P55286 799 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 C1orf220Q5T0J3 134 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 GPIHBP1Q8IV16 184 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 B3GALNT2Q8NCR0 500 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 CCDC150Q8NCX0 1101 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
CLDND1-211ENST00000506575 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 DPEP3Q9H4B8 488 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 OBSL1O75147 1896 aa16.61■□□□□ 0.25
CLDND1-211ENST00000506575 KANSL1LA0AUZ9 987 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 PSMA7O14818 248 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
CLDND1-211ENST00000506575 TRIM21P19474 475 aaKnown RBP16.6■□□□□ 0.25
CLDND1-211ENST00000506575 WEE1P30291 646 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 TCF15Q12870 199 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 UBXN2BQ14CS0 331 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 TPRG1Q6ZUI0 275 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 CCDC105Q8IYK2 499 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 CMTM8Q8IZV2 173 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 PJA1Q8NG27 643 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 TNIP3Q96KP6 325 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 SPATA17Q96L03 361 aa16.6■□□□□ 0.25
CLDND1-211ENST00000506575 CEP295NLQ96MC4 621 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms