RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CERS3Q8IU89 383 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 IL17DQ8TAD2 202 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 TMEM125Q96AQ2 219 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 SLC46A2Q9BY10 475 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 ALOXE3Q9BYJ1 711 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 AURKAIP1Q9NWT8 199 aaPredicted RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 KCNE5Q9UJ90 142 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 CNOT11Q9UKZ1 510 aaKnown RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 MAGED2Q9UNF1 606 aaPredicted RBP7.1□□□□□ -1.27
HERC4-213ENST00000506515 SHOC2Q9UQ13 582 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 MAN2B2Q9Y2E5 1009 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 NEU2Q9Y3R4 380 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 NOX1Q9Y5S8 564 aa7.1□□□□□ -1.27
HERC4-213ENST00000506515 PRAMEF33A0A0G2JMD5 474 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 LOC102723971A0A1B0GUV8 181 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 FOXD2O60548 495 aaPredicted RBP7.09□□□□□ -1.27
HERC4-213ENST00000506515 PRAMEF10O60809 474 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 TCEA3O75764 348 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 NDUFA10O95299 355 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 MYL4P12829 197 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 ITGA8P53708 1063 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 TNFAIP2Q03169 654 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 RESTQ13127 1097 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 GRM1Q13255 1194 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 STARD3Q14849 445 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 MGAT5BQ3V5L5 792 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 GAS2L3Q86XJ1 694 aa7.09□□□□□ -1.27
HERC4-213ENST00000506515 E7ENX8 843 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 F5H697 171 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 hCG_1984214I3L0E3 225 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 PLSCR1O15162 318 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 HLA-DOAP06340 250 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 BTF3P20290 206 aaKnown RBP7.08□□□□□ -1.28
HERC4-213ENST00000506515 ACVR2AP27037 513 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 NDUFV1P49821 464 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 LOXL3P58215 753 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 TAP2Q03519 686 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 DYRK1AQ13627 763 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 ARHGEF7Q14155 803 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 CYP2A13Q16696 494 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 GEN1Q17RS7 908 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 CACHD1Q5VU97 1274 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 ERAP2Q6P179 960 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 GGT6Q6P531 493 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 CATSPERGQ6ZRH7 1159 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 FANCBQ8NB91 859 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 SNX19Q92543 992 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 DVL3Q92997 716 aaPredicted RBP7.08□□□□□ -1.28
HERC4-213ENST00000506515 NACC2Q96BF6 587 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 CDK5RAP1Q96SZ6 601 aaKnown RBP7.08□□□□□ -1.28
HERC4-213ENST00000506515 AS3MTQ9HBK9 375 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 PARPBPQ9NWS1 579 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 CEP72Q9P209 647 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 RAPGEFL1Q9UHV5 662 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 MRPS17Q9Y2R5 130 aaKnown RBP7.08□□□□□ -1.28
HERC4-213ENST00000506515 FGD5Q6ZNL6 1462 aa7.08□□□□□ -1.28
HERC4-213ENST00000506515 A0A087WV62 115 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 A0A1W2PS29 197 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 GAGE12BA1L429 117 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 MYADML2A6NDP7 307 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 AREL1O15033 823 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 ADAMTS3O15072 1205 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 SOAT2O75908 522 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 NDST3O95803 873 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 A1BGP04217 495 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 NPTX2P47972 431 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 PTDSS1P48651 473 aaKnown RBP7.07□□□□□ -1.28
HERC4-213ENST00000506515 CPT1AP50416 773 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 RPS7P62081 194 aaKnown RBP7.07□□□□□ -1.28
HERC4-213ENST00000506515 FZD5Q13467 585 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 DHX8Q14562 1220 aaKnown RBP7.07□□□□□ -1.28
HERC4-213ENST00000506515 INSCQ1MX18 579 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 BEAN1Q3B7T3 259 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 ZIK1Q3SY52 487 aaPredicted RBP7.07□□□□□ -1.28
HERC4-213ENST00000506515 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 SPDYAQ5MJ70 313 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 TSHZ1Q6ZSZ6 1077 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 TMPRSS9Q7Z410 1059 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 KCTD20Q7Z5Y7 419 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 ADGRG5Q8IZF4 528 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 ZNF276Q8N554 614 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.07□□□□□ -1.28
HERC4-213ENST00000506515 VGLL2Q8N8G2 317 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 CCDC150Q8NCX0 1101 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 CPEB3Q8NE35 698 aaKnown RBP7.07□□□□□ -1.28
HERC4-213ENST00000506515 TMEM41AQ96HV5 264 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 MAGEB5Q9BZ81 275 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 XPNPEP3Q9NQH7 507 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 TESMINQ9Y4I5 508 aa7.07□□□□□ -1.28
HERC4-213ENST00000506515 CLCA1A8K7I4 914 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 PLA2G6O60733 806 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 NBNO60934 754 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 INMTO95050 263 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 RASAL1O95294 804 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 FOSP01100 380 aaPredicted RBP7.06□□□□□ -1.28
HERC4-213ENST00000506515 TPH1P17752 444 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 LRPAP1P30533 357 aa7.06□□□□□ -1.28
HERC4-213ENST00000506515 MAGEA10P43363 369 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms