RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
SNHG4-202ENST00000505522 ATP2C2O75185 946 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 NOL4O94818 638 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 ARSAP15289 507 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 LHX1P48742 406 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SPEM2Q0P670 501 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 TMEM196Q5HYL7 178 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 FSTL4Q6MZW2 842 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 LIMS2Q7Z4I7 341 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SPATA2LQ8IUW3 424 aaPredicted RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SYNPOQ8N3V7 929 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SPATA18Q8TC71 538 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 KBTBD7Q8WVZ9 684 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 MRPS31Q92665 395 aaKnown RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 TRMT2BQ96GJ1 504 aaKnown RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 ANKRD36BP1Q96IX9 119 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 MYRFLQ96LU7 910 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SLC22A12Q96S37 553 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
SNHG4-202ENST00000505522 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
SNHG4-202ENST00000505522 SOBPA7XYQ1 873 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 PRR5-ARHGAP8B1AHC4 643 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 SPTLC2O15270 562 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 RETP07949 1114 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 LMO2P25791 158 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 PCSK1P29120 753 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 PSMC1P62191 440 aaKnown RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 ARHGAP8P85298 464 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 LMNB2Q03252 620 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 MYO1EQ12965 1108 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 FAM171BQ6P995 826 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 HPDLQ96IR7 371 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 CYP2S1Q96SQ9 504 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 BACH2Q9BYV9 841 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 TRPC7Q9HCX4 862 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
SNHG4-202ENST00000505522 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
SNHG4-202ENST00000505522 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 PPP6R2O75170 966 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 HOXA6P31267 233 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 CNR2P34972 360 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 ASIC1P78348 528 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 STXBP4Q6ZWJ1 553 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 EPM2AIP1Q7L775 607 aaPredicted RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 DPH6Q7L8W6 267 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 DHX58Q96C10 678 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 FBRSL1Q9HCM7 1045 aaKnown RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 CRTAC1Q9NQ79 661 aa13.08□□□□□ -0.32
SNHG4-202ENST00000505522 CDV3Q9UKY7 258 aaKnown RBP13.08□□□□□ -0.32
SNHG4-202ENST00000505522 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 C2orf78A6NCI8 922 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 EGFP01133 1207 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 TNNC2P02585 160 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 SDHBP21912 280 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 BDNFP23560 247 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 MAGEA11P43364 429 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 FAM160A1Q05DH4 1040 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 GRSF1Q12849 480 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 MTF1Q14872 753 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 SURF1Q15526 300 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 ZNF77Q15935 545 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 FOXD4L5Q5VV16 416 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 TRAPPC11Q7Z392 1133 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 FAM160A2Q8N612 972 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 TTC16Q8NEE8 873 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 ZNF507Q8TCN5 953 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 FOXD4L4Q8WXT5 416 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
SNHG4-202ENST00000505522 ZNF396Q96N95 335 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-202ENST00000505522 MRPL45Q9BRJ2 306 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms