RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TRPC3Q13507 836 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SPECC1LQ69YQ0 1117 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 ANKRD54Q6NXT1 300 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TTC30AQ86WT1 665 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TC2NQ8N9U0 490 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 RABGGTAQ92696 567 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 PCED1BQ96HM7 432 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 LSM14BQ9BX40 385 aaKnown RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 PRG3Q9Y2Y8 225 aaPredicted RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 PCDHGC5Q9Y5F6 944 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TICRRQ7Z2Z1 1910 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 FOXN3O00409 490 aaPredicted RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TBX10O75333 385 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TADA3O75528 432 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 ZMYND10O75800 440 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 LSM8O95777 96 aaKnown RBP8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SETSIPP0DME0 302 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 GPD2P43304 727 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 UBASH3AP57075 661 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TNNC1P63316 161 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 ZBED6P86452 979 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 UBXN1Q04323 297 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 CETN1Q12798 172 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SYCE2Q6PIF2 218 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SMOQ99835 787 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SYT15Q9BQS2 421 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 NT5C1AQ9BXI3 368 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 EMILIN2Q9BXX0 1053 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TRPV4Q9HBA0 871 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 IL21Q9HBE4 155 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 CYTH4Q9UIA0 394 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 MYBPHLA2RUH7 354 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 URODP06132 367 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 TUBP50607 506 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 PPP1R15BQ5SWA1 713 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 FAM117BQ6P1L5 589 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 SMRP1Q8NCR6 262 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 B3GALT6Q96L58 329 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 DUSP16Q9BY84 665 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 ASNSD1Q9NWL6 643 aa8.82□□□□□ -1
CDC42SE2-208ENST00000505065 FMO1Q01740 532 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 DRAP1Q14919 205 aaPredicted RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 WDR44Q5JSH3 913 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 CLEC20AQ6ZU45 233 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 TMEM110Q86TL2 294 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ANKRD52Q8NB46 1076 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF397Q8NF99 534 aaPredicted RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 PANX2Q96RD6 677 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ASB3Q9Y575 518 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 NRG2O14511 850 aaPredicted RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 XPO1O14980 1071 aaKnown RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 MFAP3LO75121 409 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 IGLV3-25P01717 112 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 TPM4P67936 248 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 FKBP15Q5T1M5 1219 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 NOP9Q86U38 636 aaKnown RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 FAM35AQ86V20 835 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 RBBP8NLQ8NC74 664 aaPredicted RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 KHSRPQ92945 711 aaKnown RBP eCLIP8.81□□□□□ -16e-7■■□□□ 11.6
CDC42SE2-208ENST00000505065 PSMG2Q969U7 264 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF518BQ9C0D4 1074 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ATP2C2O75185 946 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 CXCL14O95715 111 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ADH1AP07327 375 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 CYP11B1P15538 503 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 CENPCQ03188 943 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 NFE2Q16621 373 aaPredicted RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 LEXMQ3ZCV2 418 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 TCEAL5Q5H9L2 206 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 ZNF662Q6ZS27 426 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 DCP1BQ8IZD4 617 aaKnown RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 HASPINQ8TF76 798 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 NT5C3BQ969T7 300 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 MYLPFQ96A32 169 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 FAM212AQ96EL1 285 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 TNIP3Q96KP6 325 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 UBE2TQ9NPD8 197 aaPredicted RBP8.81□□□□□ -1
CDC42SE2-208ENST00000505065 KCND1Q9NSA2 647 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
CDC42SE2-208ENST00000505065 C19orf67A6NJJ6 358 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 GFRA2O00451 464 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 BIRC3Q13489 604 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CBX2Q14781 532 aaPredicted RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 KIAA1841Q6NSI8 718 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 DSTYKQ6XUX3 929 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CCDC186Q7Z3E2 898 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 THEM5Q8N1Q8 247 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 ANKRD20A12PQ8NF67 263 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 ARNTL2Q8WYA1 636 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 RIN2Q8WYP3 895 aaPredicted RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CASP10Q92851 521 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 ISCUQ9H1K1 167 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PUF60Q9UHX1 559 aaKnown RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 HCFC2Q9Y5Z7 792 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 PLXND1Q9Y4D7 1925 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 SSU72P8A0A1W2PR75 194 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 HOXB8P17481 243 aaPredicted RBP8.8□□□□□ -1
CDC42SE2-208ENST00000505065 CDR2Q01850 454 aa8.8□□□□□ -1
CDC42SE2-208ENST00000505065 ADCY1Q08828 1119 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms